WormBase Tree Display for Gene: WBGene00000523
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| WBGene00000523 | Evidence | Person_evidence | WBPerson765 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C01C10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | clc-2 | |||||||
| Sequence_name | C01C10.1 | ||||||||
| Molecular_name | C01C10.1a | ||||||||
| C01C10.1a.1 | |||||||||
| CE28881 | |||||||||
| C01C10.1b | |||||||||
| CE53399 | |||||||||
| C01C10.1b.1 | |||||||||
| Other_name | CELE_C01C10.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | clc-2 | ||||||||
| DB_info | Database | AceView | gene | XI51 | |||||
| WormQTL | gene | WBGene00000523 | |||||||
| WormFlux | gene | WBGene00000523 | |||||||
| NDB | locus_tag | CELE_C01C10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000523|UniProtKB=Q11085 | |||||||
| family | PTHR10671 | ||||||||
| NCBI | gene | 180999 | |||||||
| RefSeq | protein | NM_001375068.3 | |||||||
| NM_076856.7 | |||||||||
| SwissProt | UniProtAcc | Q11085 | |||||||
| TrEMBL | UniProtAcc | A0A4V0IK28 | |||||||
| UniProt_GCRP | UniProtAcc | Q11085 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clc | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00032009 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003803 | ||||||||
| 00003804 | |||||||||
| 00057138 | |||||||||
| 00057139 | |||||||||
| 00057140 | |||||||||
| 00057141 | |||||||||
| 00057142 | |||||||||
| 00107533 | |||||||||
| Contained_in_operon | CEOPX088 | ||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00000522 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00000526 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00013458 | |||||||||
| WBGene00011014 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00016067 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00010742 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00016706 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021415 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description (2) | |||||||||
| Molecular_info | Corresponding_CDS | C01C10.1a | |||||||
| C01C10.1b | |||||||||
| Corresponding_transcript | C01C10.1a.1 | ||||||||
| C01C10.1b.1 | |||||||||
| Other_sequence | NAC00990_1 | ||||||||
| BU666339.1 | |||||||||
| Dviv_isotig23650 | |||||||||
| GR12997 | |||||||||
| GRC02095_1 | |||||||||
| CBC17674_1 | |||||||||
| Associated_feature | WBsf655190 | ||||||||
| WBsf662966 | |||||||||
| WBsf1005831 | |||||||||
| WBsf1005832 | |||||||||
| WBsf1005833 | |||||||||
| WBsf1023243 | |||||||||
| WBsf235933 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009908 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00088425 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077666 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077665 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039290 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1207 | ||||||||
| Expr1208 | |||||||||
| Expr2560 | |||||||||
| Expr1014543 | |||||||||
| Expr1030312 | |||||||||
| Expr1143408 | |||||||||
| Expr2010042 | |||||||||
| Expr2028283 | |||||||||
| Drives_construct | WBCnstr00010853 | ||||||||
| WBCnstr00037476 | |||||||||
| Construct_product | WBCnstr00010853 | ||||||||
| WBCnstr00037476 | |||||||||
| Antibody | WBAntibody00000650 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction | WBInteraction000126407 | ||||||||
| WBInteraction000126827 | |||||||||
| WBInteraction000140913 | |||||||||
| WBInteraction000140914 | |||||||||
| WBInteraction000147230 | |||||||||
| WBInteraction000190786 | |||||||||
| Map_info | Map | X | Position | -1.73343 | Error | 0.007289 | |||
| Positive | Positive_clone | C01C10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4948 | |||||||
| 4679 | |||||||||
| 5066 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005946 | ||||||||
| WBPaper00018356 | |||||||||
| WBPaper00039831 | |||||||||
| WBPaper00043459 | |||||||||
| WBPaper00044402 | |||||||||
| WBPaper00044723 | |||||||||
| Remark | Sequence connection from [Asano A, Tsukita S] | ||||||||
| Name exchange requested by Dr. Asano: clc-2 = C01C10.1 and clc-4 = T05A10.2 | Person_evidence | WBPerson765 | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
