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WormBase Tree Display for Gene: WBGene00000222

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Name Class

WBGene00000222SMapS_parentSequenceF45E6
IdentityVersion1
NameCGC_nameatf-6Person_evidenceWBPerson531
Sequence_nameF45E6.2
Molecular_nameF45E6.2
F45E6.2.1
CE17828
Other_nameCELE_F45E6.2Accession_evidenceNDBBX284606
Public_nameatf-6
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Disease_infoPotential_modelDOID:0110009Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:791)
Modifies_diseaseDOID:12377
Modifies_disease_in_annotationWBDOannot00000881
Molecular_infoCorresponding_CDSF45E6.2
Corresponding_transcriptF45E6.2.1
Associated_featureWBsf648618
WBsf655219
WBsf663413
WBsf978510
WBsf982250
WBsf1007312
WBsf1024056
WBsf236494
WBsf236495
Transcription_factorWBTranscriptionFactor000147
Experimental_infoRNAi_result (18)
Expr_patternChronogram64
Chronogram276
Chronogram396
Expr7566
Expr11253
Expr1022678
Expr1030139
Expr1151258
Expr2009481
Expr2027718
Drives_construct (5)
Construct_productWBCnstr00037650
WBCnstr00038820
Regulate_expr_clusterWBPaper00060224:atf-6(ok551)_downregulated
WBPaper00060224:atf-6(ok551)_upregulated
Microarray_results (22)
Expression_clusterWBPaper00029359_1197
WBPaper00029359_1225
WBPaper00029359_1291
WBPaper00029359_1367
WBPaper00029359_1483
WBPaper00029359_1494
WBPaper00029359_1546
WBPaper00029359_1561
WBPaper00032976:dosage_compensated_genes
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_embryo_enriched
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00041071:spe-44_downregulated
WBPaper00041222:unc-120(st364)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_upregulated_L3
WBPaper00045521:Oogenic
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:alovudine_72h_regulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:sod-2(ok1030)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056218:daf-16(mu86)_upregulated_Day7
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00057288:Cold_downregulated_transcript
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:ALA
WBPaper00061340:Coelomocyte
WBPaper00061340:GLR
WBPaper00061340:Parent_of_K_Kprime
WBPaper00061340:RMED
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00061527:pkn-1_20439-tbc-12_11015
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064716:paraquat_upregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066085:sin-3(syb2172)_upregulated
WBPaper00025032:cluster_116
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_N2
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027342:alpha-Synuclein(A53T)_downregulated
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00035227:heat_shock_regulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_F
WBPaper00037695:WC_5-day
WBPaper00038172:tax-6null_up_regulated
WBPaper00041002:HQ_3d_0.2mM_Down
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
[cgc6390]:herm_sex-enriched
Interaction (116)
WBProcessWBbiopr:00000046
WBbiopr:00000079
Map_infoMapXPosition7.11398Error0.001998
PositivePositive_cloneF45E6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (59)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene