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WormBase Tree Display for Gene: WBGene00278566

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Name Class

WBGene00278566SMapS_parentSequencePPA_ChrIII
IdentityVersion6
NameCGC_namePpa-unc-64From_analysisInferred_from_orthology
Sequence_namePPA40197
Molecular_namePPA40197
PPA40197.1
PP71064
Public_namePpa-unc-64
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-unc-64
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_namePpa-unc-64
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-unc-64
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000003212.6233From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.72735From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
5.45022From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00284520
00284521
00284522
00284523
OrthologWBGene00155736Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00026410Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224714Brugia malayiFrom_analysisWormBase-Compara
WBGene00225719Brugia malayiFrom_analysisWormBase-Compara
WBGene00006798Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244919Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g4427Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g171Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20367Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6713Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3764Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g610Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1538Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5520Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3378Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g13153Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-64Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14738Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02657.g27423Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10215Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008789Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14146Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g19363Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30015400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00061550Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00263285Strongyloides rattiFrom_analysisWormBase-Compara
chrIII_pilon.g9311Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00293076Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00090764Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105441Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274995Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281849Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304493Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in mitochondrial electron transport, cytochrome c to oxygen and vesicle-mediated transport. Predicted to be located in membrane. Predicted to be part of mitochondrial respiratory chain complex IV. Is an ortholog of C. elegans unc-64. In C. elegans, unc-64 is involved in several processes, including chemical synaptic transmission; positive regulation of anterior/posterior axon guidance; and ventral cord development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA40197
Corresponding_transcriptPPA40197.1
Other_sequenceEX540478.1
PT04051
GRC03259_1
SRC00925_1
ES742999.1
BU087205.1
EX916709.1
AE01924
MH06919
Oden_isotig10562
Acan_isotig18932
ACC40675_1
ACC23988_1
FC816594.1
Dviv_isotig09694
NB09456
Dviv_isotig09939
TSC12986_1
Dviv_isotig09689
BG467472.1
AYC00715_1
Name_isotig06750
HBC05258_1
HC04776
CBC03477_1
BXC07330_1
Oden_isotig10561
GO251959.1
FK806525.1
EX007264.1
CBC08426_1
EX009585.1
HBC03436_1
HC03667
FC811645.1
EX550608.1
JI173924.1
Acan_isotig03732
OOC03289_1
FK806822.1
ES739472.1
JI171374.1
EY473159.1
Dviv_isotig09940
Hbac_isotig07361
RSC04472_1
AE02037
RS07890
CB043534.1
MI04989
PTC03518_1
PPC03497_1
ES561851.1
Tcol_isotig05918
CBC15890_1
NAC00249_1
Acan_isotig03731
FG583286.1
PT01650
AYC00653_1
Oden_isotig26844
ACC00533_1
NBC01952_1
CRC05979_1
HCC02037_1
FG352238.1
PPC01148_1
TLC00160_1
HC03790
OF01580
NB09484
TV00103
PPC05158_1
NB06987
Tcol_isotig05917
FC811117.1
FK805944.1
EX548393.1
MIC04888_1
Name_isotig08825
ES742043.1
NBC03254_1
EX013423.1
TVC00075_1
Hbac_isotig00380
EX011773.1
SR00377
Tcol_isotig05919
Name_isotig02245
JI468126.1
Name_isotig04674
PPC03275_1
CB043450.1
CB042918.1
EX009436.1
ES880254.1
JK315636.1
CB043628.1
Oden_isotig10564
CB043497.1
PP00116
ACC10942_1
Oden_isotig16270
ES413331.1
Dviv_isotig09692
Tcol_isotig05920
Dviv_isotig09690
Acan_isotig19464
Dviv_isotig09943
HC03810
TDC00104_1
GR13990
AE01369
PTC00645_1
EX915064.1
Tcir_isotig06634
CB043207.1
PPC02705_1
CB043370.1
ES409456.1
PP02434
Oden_isotig16271
CJC00261_1
Oden_isotig10563
FC817211.1
MHC05842_1
Hbac_isotig00381
CB043391.1
JK315506.1
CB043678.1
Experimental_infoMicroarray_resultsGPL14372_Probes_42288
GPL14372_Probes_42289
GPL14372_Probes_42290
GPL14372_Probes_42291
GPL14372_Probes_42292
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041606:PP_X.nematophila_regulated
Remark[190208 pad] The CGC name Ppa-unc-64 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-unc-64 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene