WormBase Tree Display for Gene: WBGene00105441

WBGene00105441 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 2
    Name: CGC_name: Ppa-syx-3.1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA15887
      Molecular_name: PPA15887
        PPA15887.1
        PP06735
      Other_name: GENEPREDICTION_SNAP300000072612
        UMM-S250-5.39 Person_evidence: WBPerson606
      Public_name: Ppa-syx-3.1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-syx-3.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: syx
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00180335
      00180336
    Ortholog (51)
    Paralog: WBGene00090764 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00274995 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278566 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281849 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304493 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of C. elegans syx-3. In C. elegans, syx-3 is involved in positive regulation of defecation and regulation of muscle contraction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA15887
    Corresponding_transcript: PPA15887.1
    Other_sequence: PP01927
      PPC01279_1
  Experimental_info: Microarray_results: GPL14372_Probes_88665
      GPL14372_Probes_88666
  Method: Gene