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WormBase Tree Display for Gene: WBGene00122833

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Name Class

WBGene00122833SMapS_parentSequenceCjap.Contig17796
IdentityVersion5
NameCGC_nameCjp-unc-77From_analysisInferred_from_orthology
Sequence_nameCJA03629
Molecular_nameCJA03629a
CJA03629a.1
JA45214
CJA03629b
JA52673
CJA03629b.1
Other_nameCjp-unc-77.1From_analysisInferred_from_orthology
Public_nameCjp-unc-77
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCjp-unc-77
401 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameCjp-unc-77.1
Other_nameCjp-unc-77
528 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCjp-unc-77
Other_nameCjp-unc-77.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000041.56472From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000275.01474From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000383.54198From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
3.62319From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
3.70441From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.572927From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.590062From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.680804From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.730086From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
0.738172From_analysisRNASeq.japonica.WBls:0000041.control_mean
0.754889From_analysisRNASeq.japonica.WBls:0000041.control_median
0.779693From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.808435From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.865311From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.878054From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
WBls:00001010.808435From_analysisRNASeq.japonica.total_over_all_stages.control_median
1.51779From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00189514
00189515
00189516
00189517
00189518
OrthologWBGene00006809Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00027947Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00066082Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00140494Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00154155Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00153171Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00222695Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8570Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g184Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g185Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14560Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g16683Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21109Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10428Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7911Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g7912Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10214Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2263Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g29255Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10670Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_16627.g25421Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-77Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17351Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00045.g2384Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18713Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_18714Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_20372Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013653Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12811Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14329Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40161400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00073165Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074869Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00080174Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084742Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00092845Pristionchus pacificusFrom_analysisWormBase-Compara
chrIV_pilon.g10560Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245319Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266153Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00135142Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00216830Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00119574Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00122802Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124735Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208334Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208729Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210648Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213069Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216125Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218636Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic cation channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-77. In C. elegans, unc-77 is involved in positive regulation of GABAergic synaptic transmission; positive regulation of cholinergic synaptic transmission; and positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA03629a
CJA03629b
Corresponding_transcriptCJA03629a.1
CJA03629b.1
Other_sequenceGW412396.1
JO468378.1
FG620967.1
JI242386.1
Acan_isotig00447
FE914443.1
MC01163
FG620973.1
RS10662
CR08460
CRC03399_1
FC539987.1
ASC39627_1
FG620964.1
PT00154
EY459784.1
EY469491.1
GPC01119_1
ACC35068_1
AS09929
PSC02084_1
Acan_isotig17908
MJ04138
ACC30963_1
MA01451
Acan_isotig00446
Experimental_infoExpr_patternExpr1071107
Expr1078858
Expr1079923
Microarray_resultsGPL14145_CJA03629_3073-3132_0.902_3_C
GPL14145_CJA03629_3272-3331_0.598_375_B
GPL14145_CJA03629_3394-3453_0.808_67_A
GPL14145_CJA15938_1575-1634_0.948_1_A
GPL14145_CJA15938_1578-1637_0.933_2_B
GPL14145_CJA15938_1684-1743_0.933_3_C
GPL14145_CJA21832_337-396_0.917_1_A
MethodGene