Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CJA03629b

expand all nodes | collapse all nodes | view schema

Name Class

CJA03629bEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig17796
StructureSource_exons (14)
DB_infoDB_remarkCJP-UNC-77 protein; contains similarity to Pfam domain PF00520 (Ion transport protein); contains similarity to Interpro domains IPR005821 (Ion transport domain), IPR028823 (Sodium leak channel NALCN), IPR027359 (Voltage-dependent channel domain superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00122833
Corresponding_transcriptCJA03629b.1
Corresponding_proteinJA52673
Corresponding_oligo_setGPL14145_CJA03629_3073-3132_0.902_3_C
GPL14145_CJA03629_3272-3331_0.598_375_B
GPL14145_CJA03629_3394-3453_0.808_67_A
Microarray_resultsGPL14145_CJA03629_3073-3132_0.902_3_C
GPL14145_CJA03629_3272-3331_0.598_375_B
GPL14145_CJA03629_3394-3453_0.808_67_A
RNASeq_FPKMWBls:00000040.391939From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000273.37901From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000382.77137From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
2.81346From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.380378From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.413796From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.480371From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.529182From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.553322From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.559779From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.636379From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.730086From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
Remarkbased on Augustus prediction Cjap.Contig17796.g20224.t1[100726 mh6]
Methodcurated