WormBase Tree Display for Gene: WBGene00021325
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WBGene00021325 | SMap | S_parent | Sequence | Y34B4A | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nspg | |||||
Allele (25) | ||||||
RNASeq_FPKM (74) | ||||||
Contained_in_operon | CEOPX056 | |||||
Ortholog (24) | ||||||
Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | Panther | ||
WBGene00010793 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00011856 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00017591 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00018951 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00021322 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00022490 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00021805 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Enriched in AFD; head mesodermal cell; intestine; and pharyngeal muscle cell based on tiling array; RNA-seq; and proteomic studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; Zidovudine; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y34B4A.9 | ||||
Corresponding_transcript | Y34B4A.9.1 | |||||
Other_sequence (25) | ||||||
Associated_feature | WBsf662769 | |||||
WBsf662770 | ||||||
WBsf235697 | ||||||
Experimental_info | RNAi_result | WBRNAi00055825 | Inferred_automatically | RNAi_primary | ||
WBRNAi00033631 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1025660 | |||||
Expr1039301 | ||||||
Expr1159353 | ||||||
Expr2007220 | ||||||
Expr2025452 | ||||||
Drives_construct | WBCnstr00024579 | |||||
Construct_product | WBCnstr00024579 | |||||
Microarray_results (18) | ||||||
Expression_cluster (235) | ||||||
SAGE_tag | SAGE:gctgtgggtc | Strand | Antisense | |||
SAGE:tctgcggtcc | Strand | Sense | ||||
Unambiguously_mapped | ||||||
SAGE:gcatcgtttg | Strand | Antisense | ||||
SAGE:ttctgggctt | Strand | Sense | ||||
Unambiguously_mapped | ||||||
SAGE:ggctctgaat | Strand | Sense | ||||
Unambiguously_mapped | ||||||
SAGE:ttctgggcttgtgaata | Strand | Sense | ||||
Unambiguously_mapped | ||||||
Interaction | WBInteraction000561811 | |||||
WBInteraction000562846 | ||||||
WBInteraction000569368 | ||||||
WBInteraction000572287 | ||||||
WBInteraction000586356 | ||||||
Map_info | Positive | Positive_clone | Y34B4A | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | -5.92198 | ||||
Reference | WBPaper00041771 | |||||
WBPaper00058665 | ||||||
Method | Gene |