WormBase Tree Display for Gene: WBGene00016355
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WBGene00016355 | SMap | S_parent | Sequence | C33F10 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lact | ||||||
Allele (44) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (23) | |||||||
Paralog | WBGene00007358 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00010877 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00010897 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00014164 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00018523 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00000767 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00008410 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00021315 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | lact-5 encodes beta-lactamase domain-containing proteins. | Curator_confirmed | WBPerson1843 | |||
Date_last_updated | 18 Dec 2007 00:00:00 | ||||||
Automated_description | Enriched in several structures, including ABarpaapap; anterior hypodermis; lateral ganglion; rectal epithelium; and sensory neurons based on tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including 1-methylnicotinamide; 4-bromodiphenyl ether; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Beta-lactamase-related; Beta-lactamase; and Beta-lactamase/transpeptidase-like. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C33F10.7a | |||||
C33F10.7b | |||||||
Corresponding_CDS_history | C33F10.7:wp135 | ||||||
Corresponding_transcript | C33F10.7a.1 | ||||||
C33F10.7b.1 | |||||||
Other_sequence (12) | |||||||
Associated_feature | WBsf987711 | ||||||
WBsf987712 | |||||||
WBsf987713 | |||||||
WBsf1012137 | |||||||
Experimental_info (7) | |||||||
Map_info | Map | II | Position | -3.01883 | Error | 0.003464 | |
Positive | Positive_clone | C33F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |