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WormBase Tree Display for Gene: WBGene00016355

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Name Class

WBGene00016355SMapS_parentSequenceC33F10
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classlact
Allele (44)
RNASeq_FPKM (74)
Ortholog (23)
ParalogWBGene00007358Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010877Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010897Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014164Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018523Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000767Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008410Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021315Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionlact-5 encodes beta-lactamase domain-containing proteins.Curator_confirmedWBPerson1843
Date_last_updated18 Dec 2007 00:00:00
Automated_descriptionEnriched in several structures, including ABarpaapap; anterior hypodermis; lateral ganglion; rectal epithelium; and sensory neurons based on tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including 1-methylnicotinamide; 4-bromodiphenyl ether; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Beta-lactamase-related; Beta-lactamase; and Beta-lactamase/transpeptidase-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC33F10.7a
C33F10.7b
Corresponding_CDS_historyC33F10.7:wp135
Corresponding_transcriptC33F10.7a.1
C33F10.7b.1
Other_sequence (12)
Associated_featureWBsf987711
WBsf987712
WBsf987713
WBsf1012137
Experimental_info (7)
Map_infoMapIIPosition-3.01883Error0.003464
PositivePositive_cloneC33F10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene