WormBase Tree Display for Gene: WBGene00011856
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WBGene00011856 | SMap | S_parent | Sequence | T20D3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspg-7.1 | Person_evidence | WBPerson18244 | |||
Sequence_name | T20D3.2 | ||||||
Molecular_name | T20D3.2 | ||||||
T20D3.2.1 | |||||||
CE03671 | |||||||
Other_name | CELE_T20D3.2 | Accession_evidence | NDB | BX284604 | |||
Public_name | nspg-7.1 | ||||||
DB_info | Database | AceView | gene | 4K94 | |||
WormQTL | gene | WBGene00011856 | |||||
WormFlux | gene | WBGene00011856 | |||||
NDB | locus_tag | CELE_T20D3.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011856|UniProtKB=O01254 | |||||
family | PTHR34311 | ||||||
NCBI | gene | 177760 | |||||
RefSeq | protein | NM_069239.7 | |||||
TREEFAM | TREEFAM_ID | TF315792 | |||||
TrEMBL | UniProtAcc | O01254 | |||||
UniProt_GCRP | UniProtAcc | O01254 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspg | ||||||
Allele (21) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (26) | |||||||
Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00010793 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018951 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021321 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00021325 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00022490 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021322 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00017591 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021805 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in germ line; head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on proteomic; tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including rotenone; mianserin; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T20D3.2 | |||||
Corresponding_transcript | T20D3.2.1 | ||||||
Other_sequence (14) | |||||||
Associated_feature | WBsf230552 | ||||||
Experimental_info (7) | |||||||
Map_info | Positive | Positive_clone | T20D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | IV | 4.18007 | |||||
Reference | WBPaper00058665 | ||||||
Method | Gene |