WormBase Tree Display for Gene: WBGene00015332
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WBGene00015332 | SMap | S_parent | Sequence | C02C2 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tyr-1 | Person_evidence | WBPerson69 | |||
Sequence_name | C02C2.1 | ||||||
Molecular_name | C02C2.1 | ||||||
C02C2.1.1 | |||||||
CE06754 | |||||||
Other_name | CELE_C02C2.1 | Accession_evidence | NDB | BX284603 | |||
Public_name | tyr-1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tyr | ||||||
Allele (34) | |||||||
Strain | WBStrain00032008 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00041196 | ||||||
00041197 | |||||||
00041198 | |||||||
00041199 | |||||||
00121250 | |||||||
Ortholog (44) | |||||||
Paralog | WBGene00009001 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00010060 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00010661 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00021553 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00016419 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00022231 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00017483 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | C02C2.1 encodes a tyrosinase homolog with a glutamine/asparagine-rich domain. | Paper_evidence | WBPaper00005068 | |||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable metal ion binding activity and monooxygenase activity. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human DCT (dopachrome tautomerase) and TYR (tyrosinase). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0050633 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||
DOID:8465 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:0070097 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12450) | ||||
DOID:8923 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:0050632 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709) | ||||
DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:0070095 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:0070094 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:10123 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450) | ||||
Molecular_info | Corresponding_CDS | C02C2.1 | |||||
Corresponding_transcript | C02C2.1.1 | ||||||
Other_sequence (31) | |||||||
Associated_feature | WBsf993180 | ||||||
WBsf993181 | |||||||
WBsf993182 | |||||||
WBsf993183 | |||||||
WBsf1015330 | |||||||
WBsf225291 | |||||||
WBsf225292 | |||||||
WBsf225293 | |||||||
WBsf225294 | |||||||
Experimental_info | RNAi_result | WBRNAi00098213 | Inferred_automatically | RNAi_primary | |||
WBRNAi00039406 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028334 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00098217 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005452 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007421 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00009978 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039403 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005197 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020752 | ||||||
Expr1143519 | |||||||
Expr2017685 | |||||||
Expr2035823 | |||||||
Drives_construct | WBCnstr00028927 | ||||||
Construct_product | WBCnstr00028927 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (186) | |||||||
Interaction (17) | |||||||
Map_info | Map | III | Position | -0.517852 | Error | 0.006315 | |
Positive | Positive_clone | C02C2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5055 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00011697 | ||||||
WBPaper00022302 | |||||||
WBPaper00038491 | |||||||
WBPaper00044177 | |||||||
WBPaper00055090 | |||||||
WBPaper00061115 | |||||||
WBPaper00065140 | |||||||
Picture | WBPicture0000013093 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |