WormBase Tree Display for Gene: WBGene00016048
expand all nodes | collapse all nodes | view schema
WBGene00016048 | SMap | S_parent | Sequence | C24B9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C24B9.3 | |||||||
Molecular_name | C24B9.3 | ||||||||
C24B9.3.1 | |||||||||
CE29672 | |||||||||
Other_name | CELE_C24B9.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | C24B9.3 | ||||||||
DB_info | Database | AceView | gene | 5D186 | |||||
WormQTL | gene | WBGene00016048 | |||||||
WormFlux | gene | WBGene00016048 | |||||||
NDB | locus_tag | CELE_C24B9.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016048|UniProtKB=O76430 | |||||||
family | PTHR31024 | ||||||||
NCBI | gene | 178736 | |||||||
RefSeq | protein | NM_001028500.8 | |||||||
TrEMBL | UniProtAcc | O76430 | |||||||
UniProt_GCRP | UniProtAcc | O76430 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (147) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00007800 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
WBGene00015865 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00015993 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00000853 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00003482 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00003497 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00017965 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00019570 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020579 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00021343 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in head mesodermal cell and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by nineteen chemicals including methylmercuric chloride; stavudine; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: von Willebrand factor A-like domain superfamily; von Willebrand factor, type A; and von Willebrand factor type A domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (5) | |||||||||
Experimental_info | RNAi_result | WBRNAi00011096 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029137 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041077 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007372 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022009 | ||||||||
Expr1145113 | |||||||||
Expr2001037 | |||||||||
Expr2019255 | |||||||||
Microarray_results | SMD_C24B9.3 | ||||||||
175591_s_at | |||||||||
183010_s_at | |||||||||
A_12_P103114 | |||||||||
Aff_C24B9.3 | |||||||||
GPL13394_WBGene00016048 | |||||||||
GPL13914_C24B9.3 | |||||||||
GPL14144_C24B9.3b_1080-1139_0.941_4_B | |||||||||
GPL14144_C24B9.3b_1175-1234_0.883_22_C | |||||||||
GPL14144_C24B9.3b_1286-1345_0.953_1_A | |||||||||
GPL19516_CGZ0005667 | |||||||||
GPL19516_CGZ0005668 | |||||||||
GPL21109_C24B9.3a | |||||||||
GPL3518_CE29672 | |||||||||
GPL8304_CE_WBGene00016048_A | |||||||||
GPL8673_C24B9_3aP00017 | |||||||||
GPL8673_C24B9_3aP00026 | |||||||||
GPL8673_C24B9_3aP01055 | |||||||||
GPL8673_C24B9_3bP00671 | |||||||||
GPL8673_C24B9_3bP01115 | |||||||||
GPL9450_C24B9.3 | |||||||||
cea2.c.34112 | |||||||||
Expression_cluster (227) | |||||||||
Interaction | WBInteraction000313010 | ||||||||
WBInteraction000325438 | |||||||||
WBInteraction000383568 | |||||||||
WBInteraction000395998 | |||||||||
WBInteraction000401514 | |||||||||
WBInteraction000422630 | |||||||||
Map_info | Positive | Positive_clone | C24B9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | -13.3 | |||||||
Reference | WBPaper00041771 | ||||||||
WBPaper00064623 | |||||||||
Method | Gene |