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WormBase Tree Display for Gene: WBGene00019327

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Name Class

WBGene00019327SMapS_parentSequenceK02F3
IdentityVersion2
NameCGC_namezip-2Person_evidenceWBPerson1997
WBPerson460
Sequence_nameK02F3.4
Molecular_nameK02F3.4
K02F3.4.1
CE23848
K02F3.4.2
K02F3.4.3
Other_nameCELE_K02F3.4Accession_evidenceNDBBX284603
Public_namezip-2
DB_infoDatabaseAceViewgene3B453
WormQTLgeneWBGene00019327
WormFluxgeneWBGene00019327
NDBlocus_tagCELE_K02F3.4
PanthergeneCAEEL|WormBase=WBGene00019327|UniProtKB=Q21148
familyPTHR23334
NCBIgene175240
RefSeqproteinNM_001384015.2
SwissProtUniProtAccQ21148
TREEFAMTREEFAM_IDTF317134
UniProt_GCRPUniProtAccQ21148
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
218 Jul 2005 13:34:00WBPerson2970Name_changeCGC_namezip-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classzip
Allele (51)
StrainWBStrain00037649
RNASeq_FPKM (74)
GO_annotation (25)
Ortholog (23)
ParalogWBGene00016754Caenorhabditis elegansFrom_analysisPanther
WBGene00016997Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017755Caenorhabditis elegansFrom_analysisPanther
WBGene00021552Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionzip-2 encodes a bZIP transcription factor; ZIP-2 activity is required for regulating one branch of the immune response pathway that responds to infection by virulent strains of the bacterial pathogen Pseudomonas aeruginosa; specifically, ZIP-2 is required for inducing expression of a subset of infection response genes, including irg-1 and irg-2, and for full resistance to P. aeruginosa infection.Paper_evidenceWBPaper00027309
WBPaper00035891
Curator_confirmedWBPerson1843
Date_last_updated08 Feb 2010 00:00:00
Automated_descriptionPredicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in defense response to bacterium and positive regulation of macromolecule biosynthetic process. Predicted to be located in nucleus. Expressed in pharynx.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Modifies_diseaseDOID:14330
Modifies_disease_in_annotationWBDOannot00000499
Molecular_infoCorresponding_CDSK02F3.4
Corresponding_transcriptK02F3.4.1
K02F3.4.2
K02F3.4.3
Other_sequence (25)
Associated_feature (16)
Gene_product_bindsWBsf977574
WBsf977575
WBsf977578
WBsf977579
WBsf977583
WBsf977586
WBsf977588
WBsf977590
WBsf977592
WBsf977593
WBsf977595
WBsf977596
WBsf977597
WBsf977599
WBsf977602
WBsf977603
WBsf977605
WBsf977607
WBsf977608
WBsf977609
WBsf977610
WBsf977612
WBsf977614
WBsf977617
WBsf977618
WBsf977619
WBsf977623
WBsf977624
WBsf977625
WBsf977626
WBsf977628
WBsf977631
WBsf977632
WBsf977635
WBsf977639
WBsf977640
WBsf977641
WBsf977643
WBsf977645
WBsf977646
WBsf977647
WBsf977648
WBsf977649
WBsf977651
WBsf977652
WBsf977653
WBsf977654
WBsf977655
WBsf977657
WBsf977658
WBsf977660
WBsf977661
WBsf977662
WBsf977663
WBsf977665
WBsf977666
WBsf977667
WBsf977668
WBsf977669
WBsf977670
WBsf977671
WBsf977672
WBsf977674
WBsf977677
WBsf977679
WBsf977681
WBsf977682
WBsf977683
WBsf977686
WBsf977687
WBsf977688
WBsf977691
WBsf977692
WBsf977694
WBsf977697
WBsf977698
WBsf977699
WBsf977700
WBsf977701
WBsf977702
WBsf977703
WBsf977704
WBsf977705
WBsf977706
WBsf977709
WBsf977711
WBsf977712
WBsf977713
WBsf977714
WBsf977718
WBsf977719
WBsf977721
WBsf977722
WBsf977723
WBsf977725
WBsf977726
WBsf977728
WBsf977729
WBsf977730
WBsf977732
WBsf977733
WBsf977734
WBsf977735
WBsf977736
WBsf977738
WBsf977740
WBsf977743
WBsf977744
WBsf977746
WBsf977747
WBsf977748
WBsf977749
WBsf977750
WBsf977751
WBsf977752
WBsf977754
WBsf977757
WBsf977759
WBsf977762
WBsf977763
WBsf977764
WBsf977765
WBsf977768
WBsf977769
WBsf977770
WBsf977771
WBsf977774
WBsf977775
WBsf977776
WBsf977777
WBsf977783
WBsf977784
WBsf977786
WBsf977787
WBsf977789
WBsf977790
WBsf977791
WBsf977792
WBsf977793
WBsf977794
WBsf977796
WBsf977800
WBsf977801
WBsf977802
WBsf977803
WBsf977806
WBsf977807
WBsf977808
WBsf977809
WBsf977812
WBsf977813
WBsf977814
WBsf977816
WBsf977818
WBsf977819
WBsf977820
WBsf977821
WBsf977822
WBsf977823
WBsf977825
WBsf977826
WBsf977828
WBsf977830
WBsf977831
WBsf977833
WBsf977836
WBsf977838
WBsf977840
WBsf977841
WBsf977842
WBsf977843
WBsf977844
WBsf977845
WBsf977846
WBsf977848
WBsf977849
WBsf977851
WBsf977853
WBsf977854
WBsf977856
WBsf977857
WBsf977858
WBsf977859
WBsf977860
WBsf977861
WBsf977862
WBsf977863
WBsf977864
WBsf977865
WBsf977870
WBsf977873
WBsf977874
WBsf977875
WBsf977876
WBsf977877
WBsf977878
WBsf977880
WBsf977881
WBsf977883
WBsf977884
WBsf977885
WBsf977888
WBsf977889
WBsf977890
WBsf977891
WBsf977893
WBsf977894
WBsf977896
WBsf977897
WBsf977898
WBsf977899
WBsf977900
WBsf977903
WBsf977904
WBsf977905
WBsf977906
WBsf977907
WBsf977908
WBsf977910
WBsf977911
WBsf977912
WBsf977913
WBsf977914
WBsf977915
WBsf977917
WBsf977918
WBsf977919
WBsf977920
WBsf977921
WBsf977922
WBsf977923
WBsf977924
WBsf977925
WBsf977926
WBsf977927
WBsf977928
WBsf977929
WBsf977931
WBsf977932
WBsf977933
WBsf977934
WBsf977936
WBsf977937
WBsf977939
WBsf977940
WBsf977941
WBsf977943
WBsf977946
WBsf977948
Transcription_factorWBTranscriptionFactor000223
Experimental_infoRNAi_resultWBRNAi00108174Inferred_automaticallyRNAi_primary
WBRNAi00097021Inferred_automaticallyRNAi_primary
WBRNAi00049751Inferred_automaticallyRNAi_primary
WBRNAi00033889Inferred_automaticallyRNAi_primary
WBRNAi00084564Inferred_automaticallyRNAi_primary
WBRNAi00108175Inferred_automaticallyRNAi_primary
WBRNAi00113260Inferred_automaticallyRNAi_primary
WBRNAi00006513Inferred_automaticallyRNAi_primary
WBRNAi00108172Inferred_automaticallyRNAi_primary
WBRNAi00016485Inferred_automaticallyRNAi_primary
WBRNAi00084566Inferred_automaticallyRNAi_primary
WBRNAi00108168Inferred_automaticallyRNAi_primary
WBRNAi00084581Inferred_automaticallyRNAi_primary
WBRNAi00084565Inferred_automaticallyRNAi_primary
WBRNAi00084580Inferred_automaticallyRNAi_primary
WBRNAi00084582Inferred_automaticallyRNAi_primary
WBRNAi00108169Inferred_automaticallyRNAi_primary
WBRNAi00084579Inferred_automaticallyRNAi_primary
WBRNAi00084562Inferred_automaticallyRNAi_primary
WBRNAi00108170Inferred_automaticallyRNAi_primary
WBRNAi00097992Inferred_automaticallyRNAi_primary
WBRNAi00113031Inferred_automaticallyRNAi_primary
WBRNAi00110090Inferred_automaticallyRNAi_primary
WBRNAi00084563Inferred_automaticallyRNAi_primary
WBRNAi00108173Inferred_automaticallyRNAi_primary
Expr_patternExpr7776
Expr10045
Expr1020648
Expr1038353
Expr1153467
Expr2018156
Expr2036293
Drives_construct (6)
Construct_productWBCnstr00016820
WBCnstr00018893
WBCnstr00018894
WBCnstr00019915
WBCnstr00022575
WBCnstr00025914
Regulate_expr_clusterWBPaper00035891:PA_induced_zip-2_dependent
WBPaper00035891:zip-2(RNAi)_downregulated
WBPaper00035891:zip-2(RNAi)_upregulated
WBPaper00053605:zip-2(RNAi)_downregulated
WBPaper00053605:zip-2(RNAi)_upregulated
Microarray_results (21)
Expression_cluster (221)
Interaction (49)
WBProcessWBbiopr:00000008
WBbiopr:00000039
Map_infoMapIIIPosition-25.7689
PositivePositive_cloneK02F3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (32)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
[200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-25.7711)
MethodGene