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WormBase Tree Display for Gene: WBGene00003408

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Name Class

WBGene00003408SMapS_parentSequenceF57C12
IdentityVersion1
NameCGC_namemrp-2Person_evidenceWBPerson490
Sequence_nameF57C12.4
Molecular_nameF57C12.4
F57C12.4.1
CE26370
Other_nameCELE_F57C12.4Accession_evidenceNDBBX284606
Public_namemrp-2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:31WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmrp
Allele (127)
Legacy_information[C.elegansII] NMK. Encodes predicted protein similar to human MRP. [NL]
mrp for Multidrug Resistance-associated Protein family. mrp-2 is F57C12.4, encodes 1475aa protein, 48% identical to human MRP1. No mutants known.
StrainWBStrain00032405
RNASeq_FPKM (74)
GO_annotation (13)
Contained_in_operonCEOPX154
OrthologWBGene00060267Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00023874Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00025084Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00030001Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00030002Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00030162Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00036076Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00041902Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042600Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00164885Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00060810Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00144167Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157855Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159141Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190178Caenorhabditis brenneriFrom_analysisWormBase-Compara
CSP21.g1359Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5796Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15822Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP39.g1175Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g16571Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_X.g22288Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18159Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02111.g24904Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02111.g24905Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09210Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001544Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_022173Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05325Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12288Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1891Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g1893Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0019900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g18298Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00096483Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103548Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00258150Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288990Trichuris murisFrom_analysisWormBase-Compara
WBGene00293202Trichuris murisFrom_analysisWormBase-Compara
SGD:S000002542Saccharomyces cerevisiaeFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
FB:FBgn0032456Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-050517-16Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-110208-2Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:53Homo sapiensFrom_analysisInparanoid
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:51Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:54Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:102676Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
MGI:1923658Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:3112Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
RGD:71101Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ParalogWBGene00000477Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003407Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00003411Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003410Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003409Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003414Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003413Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003412Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionmrp-2 encodes a predicted multidomain transmembrane protein that is a member of the ATP-binding cassette (ABC) superfamily of transport proteins and is homologous to the human multidrug resistance-associated protein 1 (MRP1, OMIM:158343); by homology, MRP-2 is predicted to function as a membrane pump that couples the energy of ATP hydrolysis to membrane transport; as loss of MRP-2 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of MRP-2 in C. elegans development and/or behavior is not yet known; mrp-2 expression is, however, upregulated early in the exit from the alternative dauer stage and then remains induced, suggesting that MRP-2 activity is required for the transition to, and maintenance of, a more active metabolic state.Paper_evidenceWBPaper00002619
WBPaper00004424
WBPaper00005859
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in several diseases, including bile duct disease (multiple); leukemia (multiple); and lung disease (multiple). Is an ortholog of human ABCC3 (ATP binding cassette subfamily C member 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (13)
Molecular_info (4)
Experimental_infoRNAi_resultWBRNAi00097976Inferred_automaticallyRNAi_primary
WBRNAi00048850Inferred_automaticallyRNAi_primary
WBRNAi00015883Inferred_automaticallyRNAi_primary
Expr_patternChronogram310
Expr6241
Expr1012747
Expr1031577
Expr1152599
Expr2013687
Expr2031922
Drives_constructWBCnstr00002777
Microarray_results (21)
Expression_cluster (186)
Interaction (48)
Map_infoMapXPosition-19.6347Error0.009197
PositivePositive_cloneF57C12Person_evidenceWBPerson4545
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (15)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene