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WormBase Tree Display for Gene: WBGene00030002

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Name Class

WBGene00030002SMapS_parentSequencecb25.fpc1402c
IdentityVersion2
NameCGC_nameCbr-mrp-2From_analysisInferred_from_orthology
Sequence_nameCBG08146
Molecular_nameCBG08146a
CBG08146a.1
CBP16125
CBG08146b
CBP46884
CBG08146b.1
Other_nameCBG_08146Accession_evidenceNDBHE600971
Public_nameCbr-mrp-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mrp-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmrp
AlleleWBVar00009812
WBVar00009817
RNASeq_FPKMWBls:000000213.8288From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
4.55095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
5.73059From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.03678From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.52995From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.14077From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.41007From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.293427From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.586853From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.236678From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.27451From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000042.70532From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.80821From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.91111From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.66909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
2.83016From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.84632From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3.11591From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000270.420604From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.3837From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.34038From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.38156From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.9381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.0207From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.13924From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000357.36738From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.53934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
20.1962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.84105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
6.7767From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.82224From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.71235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000412.11719From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.36169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.65736From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.95303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.99739From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.55763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.75533From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.85517From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.24241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.89907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.325114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.376919From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.381818From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.561376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.616285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.471597From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.526564From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.27479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.91111From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.57457From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.87064From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.66839From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133413
00133414
00133415
00133416
00133417
00133418
Ortholog (30)
ParalogWBGene00030001Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00023874Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025084Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029634Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030162Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030970Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034888Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036076Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041902Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042600Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans mrp-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08146a
CBG08146b
Corresponding_CDS_historyCBG08146:bp194
CBG08146:bp255
Corresponding_transcriptCBG08146a.1
CBG08146b.1
Other_sequence (43)
Experimental_infoExpr_patternExpr1058060
Microarray_resultsGPL8303_CB6_WBGene00030002_A
GPL14143_CBG08146_3248-3307_0.780_62_B
GPL14143_CBG08146_4180-4239_0.752_149_C
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene