WormBase Tree Display for Gene: WBGene00007129
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WBGene00007129 | SMap | S_parent | Sequence | B0272 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (25) | ||||||
Strain | WBStrain00003159 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00045533 | |||||
00045534 | ||||||
00045535 | ||||||
00045536 | ||||||
00045537 | ||||||
00045538 | ||||||
00045539 | ||||||
00045540 | ||||||
00045541 | ||||||
00045542 | ||||||
00045543 | ||||||
00115345 | ||||||
00115346 | ||||||
00115347 | ||||||
00115348 | ||||||
Ortholog (33) | ||||||
Paralog | WBGene00010035 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00019978 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00001150 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00001157 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00001158 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00020347 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00022130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | B0272.3 encodes a 3-hydroxyacyl-CoA dehydrogenase; by homology, the product of B0272.3 is predicted to function in mitochondrial fatty acid metabolism by catalyzing the NAD+-dependent oxidation of short-chain hydroxyacyl CoAs; large-scale expression studies indicate that B0272.3 is widely expressed. | Paper_evidence | WBPaper00031006 | ||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 11 Nov 2008 00:00:00 | |||||
Automated_description | Predicted to enable 3-hydroxyacyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in mitochondrion. Expressed widely. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 4. Is an ortholog of human HADH (hydroxyacyl-CoA dehydrogenase). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0070215 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4799) | |
Molecular_info | Corresponding_CDS | B0272.3 | ||||
Corresponding_transcript | B0272.3.1 | |||||
Other_sequence (102) | ||||||
Associated_feature | WBsf648410 | |||||
WBsf1006429 | ||||||
WBsf1023558 | ||||||
WBsf236161 | ||||||
Experimental_info | RNAi_result | WBRNAi00102622 | Inferred_automatically | RNAi_primary | ||
WBRNAi00038826 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00009645 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00028042 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00090695 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Chronogram2006 | |||||
Expr70 | ||||||
Expr5032 | ||||||
Expr1012851 | ||||||
Expr1033066 | ||||||
Expr1143029 | ||||||
Expr2000105 | ||||||
Expr2018321 | ||||||
Drives_construct | WBCnstr00003637 | |||||
WBCnstr00033976 | ||||||
Construct_product | WBCnstr00033976 | |||||
Microarray_results (19) | ||||||
Expression_cluster (140) | ||||||
Interaction (13) | ||||||
Map_info | Positive | Positive_clone | B0272 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | 1.20398 | ||||
Reference | WBPaper00026800 | |||||
WBPaper00038491 | ||||||
WBPaper00042257 | ||||||
WBPaper00049828 | ||||||
WBPaper00055090 | ||||||
Method | Gene |