WormBase Tree Display for Gene: WBGene00007129

WBGene00007129 SMap: S_parent: Sequence: B0272
  Identity: Version: 1
    Name: Sequence_name: B0272.3
      Molecular_name: B0272.3
        B0272.3.1
        CE00852
      Other_name: CELE_B0272.3 Accession_evidence: NDB BX284606
      Public_name: B0272.3
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (25)
    Strain: WBStrain00003159
    RNASeq_FPKM (74)
    GO_annotation: 00045533
      00045534
      00045535
      00045536
      00045537
      00045538
      00045539
      00045540
      00045541
      00045542
      00045543
      00115345
      00115346
      00115347
      00115348
    Ortholog (33)
    Paralog: WBGene00010035 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00019978 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001150 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001157 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001158 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020347 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00022130 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: B0272.3 encodes a 3-hydroxyacyl-CoA dehydrogenase; by homology, the product of B0272.3 is predicted to function in mitochondrial fatty acid metabolism by catalyzing the NAD+-dependent oxidation of short-chain hydroxyacyl CoAs; large-scale expression studies indicate that B0272.3 is widely expressed. Paper_evidence: WBPaper00031006
          Curator_confirmed: WBPerson1843
          Date_last_updated: 11 Nov 2008 00:00:00
      Automated_description: Predicted to enable 3-hydroxyacyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in mitochondrion. Expressed widely. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 4. Is an ortholog of human HADH (hydroxyacyl-CoA dehydrogenase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0070215 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:4799)
  Molecular_info: Corresponding_CDS: B0272.3
    Corresponding_transcript: B0272.3.1
    Other_sequence: MI04825
      SRC10436_1
      MI04977
      BMC11348_1
      JI170486.1
      ES739694.1
      JO472365.1
      MI05015
      MAC00508
      MIC03610_1
      NBC07229_1
      Tcir_isotig07294
      Dviv_isotig05405
      JI473471.1
      MIC06671_1
      MA02078
      EX014881.1
      ES410126.1
      MIC04870_1
      JI479502.1
      SS02223
      EG025601.1
      NB06795
      MIC03370_1
      XI04801
      PPC03588_1
      MIC06205_1
      ES414059.1
      Dviv_isotig05409
      ES411144.1
      FC812236.1
      MH00320
      MIC04085_1
      GP02028
      ASC02136_1
      MH01841
      TM01595
      XI02807
      SRC05370_1
      CV199253.1
      MI05160
      ASC19333_1
      SSC06091_1
      Dviv_isotig05411
      Dviv_isotig05414
      MHC01088_1
      Dviv_isotig05407
      CBC08290_1
      HBC00219_1
      MA01200
      GRC05206_1
      BXC07392_1
      EX501012.1
      HGC00402_1
      Tcol_isotig11383
      ES740216.1
      Dviv_isotig05410
      HG10723
      JI459105.1
      Hbac_isotig03363
      ES569532.1
      MIC04435_1
      MI05612
      EX007326.1
      GPC03052_1
      XIC05453_1
      FC817858.1
      ES564674.1
      MH02262
      ES744590.1
      JI477925.1
      Tcir_isotig24757
      MI05168
      AS02132
      GR17623
      HBC21215_1
      JI172083.1
      Dviv_isotig05408
      Acan_isotig13023
      TV01296
      Dviv_isotig05412
      ES568749.1
      AS16425
      GR17622
      MHC08019_1
      CJC03018_1
      TVC01088_1
      JO471153.1
      Name_isotig04848
      MI05549
      Dviv_isotig05406
      HG02664
      Tcol_isotig11382
      TMC01288_1
      Dviv_isotig05413
      MI02547
      ES739599.1
      ES567235.1
      MI04770
      FG619543.1
      BUC01909_1
      Tcir_isotig11175
    Associated_feature: WBsf648410
      WBsf1006429
      WBsf1023558
      WBsf236161
  Experimental_info: RNAi_result: WBRNAi00102622 Inferred_automatically: RNAi_primary
      WBRNAi00038826 Inferred_automatically: RNAi_primary
      WBRNAi00009645 Inferred_automatically: RNAi_primary
      WBRNAi00028042 Inferred_automatically: RNAi_primary
      WBRNAi00090695 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram2006
      Expr70
      Expr5032
      Expr1012851
      Expr1033066
      Expr1143029
      Expr2000105
      Expr2018321
    Drives_construct: WBCnstr00003637
      WBCnstr00033976
    Construct_product: WBCnstr00033976
    Microarray_results (19)
    Expression_cluster (140)
    Interaction (13)
  Map_info: Positive: Positive_clone: B0272 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 1.20398
  Reference: WBPaper00026800
    WBPaper00038491
    WBPaper00042257
    WBPaper00049828
    WBPaper00055090
  Method: Gene