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WormBase Tree Display for Gene: WBGene00023408

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Name Class

WBGene00023408SMapS_parentSequenceT09A5
IdentityVersion2
NameCGC_namecex-2Person_evidenceWBPerson51
Sequence_nameT09A5.1
Molecular_nameT09A5.1a
T09A5.1a.1
CE41840
T09A5.1b
CE41841
T09A5.1b.1
Other_nameCELE_T09A5.1Accession_evidenceNDBBX284602
Public_namecex-2
DB_infoDatabase (10)
SpeciesCaenorhabditis elegans
HistoryVersion_change115 Jun 2004 09:41:45WBPerson1971EventCreated
216 Jul 2004 14:54:06WBPerson1971EventAcquires_mergeWBGene00011632
Acquires_mergeWBGene00011632
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcex
Allele (34)
StrainWBStrain00001820
WBStrain00001821
WBStrain00032775
WBStrain00051758
RNASeq_FPKM (74)
GO_annotation00046140
Ortholog (26)
ParalogWBGene00016965Caenorhabditis elegansFrom_analysisPanther
WBGene00017240Caenorhabditis elegansFrom_analysisPanther
WBGene00019760Caenorhabditis elegansFrom_analysisPanther
WBGene00023407Caenorhabditis elegansFrom_analysisTreeFam
Panther
Structured_descriptionAutomated_descriptionPredicted to enable metal ion binding activity. Expressed in head and tail.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST09A5.1a
T09A5.1b
Corresponding_CDS_historyT09A5.1:wp111
T09A5.1a:wp184
T09A5.1b:wp184
Corresponding_transcriptT09A5.1a.1
T09A5.1b.1
Other_sequenceCBC04518_1
Acan_isotig17164
EV852753.1
AE00658
DVC00671_1
AYC01425_1
CJC00197_1
Associated_featureWBsf650273
WBsf665253
WBsf988575
WBsf988576
WBsf1012608
WBsf223399
WBsf223400
Experimental_infoRNAi_resultWBRNAi00035371Inferred_automaticallyRNAi_primary
WBRNAi00018484Inferred_automaticallyRNAi_primary
WBRNAi00052914Inferred_automaticallyRNAi_primary
Expr_patternChronogram1560
Expr6646
Expr6647
Expr1023673
Expr1156516
Expr2009930
Expr2028170
Drives_constructWBCnstr00002616
WBCnstr00002617
WBCnstr00023883
Construct_productWBCnstr00023883
Microarray_results (23)
Expression_clusterWBPaper00029359_1280
WBPaper00029359_1444
WBPaper00029359_1504
WBPaper00029359_1578
WBPaper00029359_1604
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033070:Rhine_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00040420:ALM_PLM_enriched
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045314:S.aureus-induced_N2
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045971:tunicamycin_upregulated_RtcB(null)
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046121:mesoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00048988:neuron_expressed
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00050053:muscle_enriched_Day4
WBPaper00050053:muscle_enriched_Day12
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:alovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060661:sensory-neuron_depleted
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:hmc
WBPaper00061340:hmc_homolog
WBPaper00061340:URX
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:F16C3.2-far-7
WBPaper00061651:FLP_enriched
WBPaper00061651:RIC_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064505:tamoxifen_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:AFD_depleted
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_downregulated_Day11
WBPaper00065841:4_0
WBPaper00065841:4_1
WBPaper00065841:4_2
WBPaper00065841:24_1
WBPaper00065841:26_2
WBPaper00065841:48_0
WBPaper00065841:70_0
WBPaper00065841:120_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_12
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_C
WBPaper00037695:WC_5-day
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.5
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045015:nhr-25(RNAi)_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00050538:Fasting_upregulated
[cgc5376]:let-60(G12V)-regulated_genes
[cgc6390]:Cluster_A
Interaction (66)
Map_infoMapIIPosition0.576926Error0.000619
PositivePositive_cloneT09A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00044578
WBPaper00060121
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene