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WormBase Tree Display for Gene: WBGene00018921

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Name Class

WBGene00018921SMapS_parentSequenceF56A6
IdentityVersion3
NameCGC_namesago-2Paper_evidenceWBPaper00028800
Person_evidenceWBPerson419
Sequence_nameF56A6.1
Molecular_nameF56A6.1a
F56A6.1a.1
CE25906
F56A6.1b
CE33401
F56A6.1b.1
Other_namewago-6Paper_evidenceWBPaper00035262
Y65B4A.gCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_F56A6.1Accession_evidenceNDBBX284601
Public_namesago-2
DB_infoDatabaseAceViewgene1B93
WormQTLgeneWBGene00018921
WormFluxgeneWBGene00018921
NDBlocus_tagCELE_F56A6.1
PanthergeneCAEEL|WormBase=WBGene00018921|UniProtKB=A0A0U1RML5
familyPTHR22891
NCBIgene171653
RefSeqproteinNM_001392310.1
NM_058357.4
TREEFAMTREEFAM_IDTF316656
TrEMBLUniProtAccA0A0U1RML5
A0A0U1RML6
UniProt_GCRPUniProtAccA0A0U1RML5
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
211 Dec 2006 12:13:29WBPerson1847Name_changeCGC_namesago-2
326 Mar 2014 10:22:27WBPerson2970Name_changeOther_namewago-6
StatusLive
Gene_info (11)
Molecular_infoCorresponding_CDSF56A6.1a
F56A6.1b
Corresponding_transcriptF56A6.1a.1
F56A6.1b.1
Other_sequenceCJC01979_1
CR03009
CBC12181_1
CRC07614_1
CJC12846_1
Associated_featureWBsf643023
WBsf217148
WBsf217149
WBsf217150
Experimental_infoRNAi_resultWBRNAi00003806Inferred_automaticallyRNAi_primary
WBRNAi00040943Inferred_automaticallyRNAi_primary
WBRNAi00061632Inferred_automaticallyRNAi_primary
WBRNAi00037701Inferred_automaticallyRNAi_primary
WBRNAi00021245Inferred_automaticallyRNAi_primary
WBRNAi00002990Inferred_automaticallyRNAi_primary
WBRNAi00095808Inferred_automaticallyRNAi_primary
WBRNAi00040942Inferred_automaticallyRNAi_primary
Expr_patternExpr16414
Expr1038163
Expr1152383
Expr2015582
Expr2033817
Microarray_results (44)
Expression_clusterWBPaper00027022:cnb-1(jh103)_upregulated
WBPaper00028451:Abundant_spermatogenesis_enriched
WBPaper00032425:down_in_rde-4
WBPaper00032425:down_in_zfp-1
WBPaper00032425:up_in_alg-1
WBPaper00032425:up_in_lin-35
WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
WBPaper00035269:cde-1_regulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00036738:500uM_Heme_upregulated
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038168:lin-35_upregulated
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00041075:hcf-1(-)_skn-1(+)_downregulated
WBPaper00044030:nhr-8(hd117)_upregulated
WBPaper00044426:rotenone_5day_downregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045257:bar-1(ga80)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00046509:lin-35(n745)_upregulated
WBPaper00047131:daf-2(e1370)_downregulated_N2-background
WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
WBPaper00048952:glucose_repressed
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050121:mir-60(n4947)_upregulated
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050504:hrp-2(RNAi)_upregulated
WBPaper00050599:nicotine(0.01mM)_upregulated
WBPaper00050599:nicotine(1mM)_upregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050743:elli-1(sam-3)_upregulated
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:ash-2(RNAi)_regulated_intestine
WBPaper00051039:intestine_enriched
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_specific
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053814:15C_downregulated_OP50
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:germline_expressed
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056167:Cry5B_downregulated
WBPaper00056218:daf-16(mu86)_downregulated_Day7
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00057143:ztf-11(RNAi)_upregulated
WBPaper00057347:nhr-14(tm1473)_upreglated
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059027:neuron-synapses_depleted
WBPaper00059117:B.subtilis_downregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059440:GLP-1_activated
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060084:cco-1(RNAi)_downregulated_N2
WBPaper00060273:isp-1(qm150)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060661:sensory-neuron_depleted
WBPaper00060871:M.humicola-extract_1h_regulated
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061319:pnp-1(jy90)_upregulated
WBPaper00061319:pnp-1(jy121)_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061466:nath-10(icb102)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00062056:lin-15B(n744)_upregulated
WBPaper00062056:lin-15B(we23)_upregulated
WBPaper00062056:lin-35(n745)_upregulated
WBPaper00062156:jmjd-1.2(zr1010)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:daf-16(RNAi)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064315:mes-3(bn199)_downregulated_EGCs
WBPaper00064315:mes-3(bn199)_downregulated_PGCs
WBPaper00064315:mes-4(bn73)_downregulated_EGCs
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064871:hypoxia_upregulated_F3
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065086:N2_N.ironsii_regulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065331:100nM-ivermectin_downregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_upregulated_N2
WBPaper00065877:rege-1(imm070)_upregulated_PA14
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00066085:sin-3(tm1276)_downregulated
cgc4386_cluster_1_2
cgc4489_group_3
cgc4489_group_25
WBPaper00005124:progesterone_10-9M_regulated
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025032:cluster_6
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00028564:CeMM_vs_NGM_downregulated
WBPaper00030839:Embryo_A_Class
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031703:heme_responsive_7
WBPaper00034661:AgNPs_downregulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_H
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00041174:environmental
WBPaper00041174:genotype_environment_interaction
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042128:gei-8(ok1671)_downregulated
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
[cgc5767]:cluster_1
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(53_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:Cluster_F
Interaction (60)
Map_info (3)
Reference (12)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene