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WormBase Tree Display for Gene: WBGene00013575

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Name Class

WBGene00013575SMapS_parentSequenceY76A2B
IdentityVersion2
NameCGC_nameacs-5Paper_evidenceWBPaper00031915
Person_evidenceWBPerson2239
WBPerson237
WBPerson7030
Sequence_nameY76A2B.3
Molecular_nameY76A2B.3
Y76A2B.3.1
CE19275
Other_nameCELE_Y76A2B.3Accession_evidenceNDBBX284603
Public_nameacs-5
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
217 Apr 2008 14:07:55WBPerson2970Name_changeCGC_nameacs-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacs
Allele (63)
StrainWBStrain00032699
RNASeq_FPKM (74)
GO_annotation00103337
00103338
00103339
00103340
00103341
00103342
00103343
00103344
00103345
Ortholog (54)
Paralog (18)
Structured_descriptionAutomated_descriptionPredicted to enable long-chain fatty acid-CoA ligase activity. Predicted to be involved in long-chain fatty acid metabolic process. Predicted to be located in endoplasmic reticulum and membrane. Expressed in hypodermis. Human ortholog(s) of this gene implicated in congenital diarrhea. Is an ortholog of human ACSL5 (acyl-CoA synthetase long chain family member 5).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0060774Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:16526)
Molecular_infoCorresponding_CDSY76A2B.3
Corresponding_transcriptY76A2B.3.1
Other_sequence (58)
Associated_feature (5)
Experimental_infoRNAi_result (14)
Expr_patternExpr8138
Expr12154
Expr1018046
Expr1036067
Expr1161900
Expr2009216
Expr2027453
Drives_constructWBCnstr00013137
WBCnstr00020293
WBCnstr00029591
Construct_productWBCnstr00029591
Microarray_results (24)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032528:L3_enriched
WBPaper00035073:mitochondria_protein
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040965:lipid-droplet_associated_protein
WBPaper00044128:DietaryRestriction_downregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_downregulated_Day5
WBPaper00044746:aging_downregulated_HeatShock
WBPaper00045521:Gender_Neutral
WBPaper00046121:endoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046499:AMPK_regulated
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00046509:lin-35(n745)_downregulated
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050698:DEP-1_interacting
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:intestine_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00052987:UV_downregulated_xpc-1;csb-1
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00054192:cold-shock_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056284:ints-6(t1903)_downregulated
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay4
WBPaper00056731:human-amylin_downregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059253:sucrose_stearic-acid_upregulated
WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_upregulated_N2
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(overexpression)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:hyp7_AB_lineage
WBPaper00061340:hyp7_C_lineage
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061341:28C_48h_downregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:dhs-28_22199-acs-14
WBPaper00061818:ELKS-1_interacting
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062440:crh-1(n3315)_upregulated
WBPaper00062456:doxycycline_upregulated_CB4856_protein
WBPaper00062590:Aging_downregulated_neuron
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00064952:Day10_vs_L4_downregulated_25C
WBPaper00064992:Capsaicin_downregulated
WBPaper00064992:Eugenol_downregulated
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:2_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
cgc4489_group_3
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025032:cluster_2
WBPaper00026952:class_A
WBPaper00026980:intestine_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_6
WBPaper00034739:N2moreDR1350
WBPaper00034757:down_by_oxidative_stress
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00036286:Pattern_C
WBPaper00037695:WC_5-day
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00040184:hcf-1down_sir-2.1down_daf-2down
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041267:SpaceFlight_Downregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053688:E.faecium_downregulated
WBPaper00055899:nitroguanidine_regulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(83_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(83_min)
[cgc6390]:Cluster_C
Interaction (34)
Map_infoMapIIIPosition21.2603Error0.001675
PositivePositive_cloneY76A2BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00026800
WBPaper00029292
WBPaper00031915
WBPaper00038491
WBPaper00042257
WBPaper00055090
WBPaper00058959
WBPaper00061547
WBPaper00062388
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene