WormBase Tree Display for Gene: WBGene00013301

WBGene00013301 SMap: S_parent: Sequence: Y57G11C
  Identity: Version: 1
    Name: Sequence_name: Y57G11C.3
      Molecular_name: Y57G11C.3a
        Y57G11C.3a.1
        CE24473
        Y57G11C.3b
        CE14930
        Y57G11C.3b.1
      Other_name: CELE_Y57G11C.3 Accession_evidence: NDB BX284604
      Public_name: Y57G11C.3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (18)
    RNASeq_FPKM (74)
    GO_annotation (16)
    Contained_in_operon: CEOP4667
    Ortholog (37)
    Structured_description: Concise_description: Y57G11C.3 encodes the C. elegans 6-phosphogluconolactonase (6PGL) ortholog; by homology, the product of Y57G11C.3 is predicted to catalyze the second reaction of the oxidative branch of the pentose-phosphate pathway in which 6-phosphogluconolactone is converted to 6-phosphogluconate. Curator_confirmed: WBPerson1843
          Date_last_updated: 21 Jan 2009 00:00:00
      Automated_description: Predicted to enable 6-phosphogluconolactonase activity. Predicted to be involved in pentose-phosphate shunt, oxidative branch. Located in nucleus. Expressed in germ cell. Is an ortholog of human PGLS (6-phosphogluconolactonase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y57G11C.3a
      Y57G11C.3b
    Corresponding_transcript: Y57G11C.3a.1
      Y57G11C.3b.1
    Other_sequence (24)
    Associated_feature: WBsf646565
      WBsf660937
      WBsf229526
      WBsf229527
  Experimental_info: RNAi_result (21)
    Expr_pattern: Expr9437
      Expr15057
      Expr1014359
      Expr1035931
      Expr1161110
      Expr2008064
      Expr2026303
    Drives_construct: WBCnstr00029702
    Construct_product: WBCnstr00014002
      WBCnstr00029702
    Microarray_results (20)
    Expression_cluster: WBPaper00037086:biotin_regulated
      WBPaper00038289:oocyte_protein
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00041072:UTX-1_interacting_protein
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044746:aging_upregulated_HeatShock
      WBPaper00045521:Gender_Neutral
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00048910:mRNA-interacting_protein
      WBPaper00048988:neuron_expressed
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_nucleus_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:intestine_nucleus_expressed
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00054913:AKIR-1_interacting_protein
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056165:MINA-1_interacting_mRNA
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00059471:EGL-43_interacting
      WBPaper00059605:MUT-16_interacting
      WBPaper00061527:F31C3.4_6048-cutc-1_15804
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064716:paraquat_upregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:AFD_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      cgc4489_group_2
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00027342:alpha-Synuclein(WT)_upregulated
      WBPaper00031832:slr-2_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_H
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(23_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
    Interaction (68)
  Map_info: Positive: Positive_clone: Y57G11C Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 12.4444
  Reference (7)
  Method: Gene