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WormBase Tree Display for Gene: WBGene00009163

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Name Class

WBGene00009163SMapS_parentSequenceF26E4
IdentityVersion2
NameCGC_namedrsh-1Person_evidenceWBPerson490
Sequence_nameF26E4.10
Molecular_nameF26E4.10a
F26E4.10a.1
CE29039
F26E4.10b
CE46611
F26E4.10b.1
Other_nameCELE_F26E4.10Accession_evidenceNDBBX284601
Public_namedrsh-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
223 Jul 2004 12:37:47WBPerson1971Name_changeCGC_namedrsh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdrsh
Allele (64)
StrainWBStrain00036356
WBStrain00049716
WBStrain00049591
WBStrain00050761
WBStrain00050760
WBStrain00050750
WBStrain00054650
In_clusterconserved_miRNA_siRNA_cluster
RNASeq_FPKM (74)
GO_annotation (25)
Contained_in_operonCEOP1564
Ortholog (44)
Structured_description (2)
Molecular_infoCorresponding_CDSF26E4.10a
F26E4.10b
Corresponding_CDS_historyF26E4.10:wp52
F26E4.10:wp62
F26E4.10b:wp228
Corresponding_transcriptF26E4.10a.1
F26E4.10b.1
Other_sequence (24)
Associated_featureWBsf649519
WBsf220147
WBsf220148
Experimental_infoRNAi_resultWBRNAi00045638Inferred_automaticallyRNAi_primary
WBRNAi00003483Inferred_automaticallyRNAi_primary
WBRNAi00061626Inferred_automaticallyRNAi_primary
WBRNAi00116443Inferred_automaticallyRNAi_primary
WBRNAi00084844Inferred_automaticallyRNAi_primary
WBRNAi00045637Inferred_automaticallyRNAi_primary
WBRNAi00003481Inferred_automaticallyRNAi_primary
WBRNAi00085189Inferred_automaticallyRNAi_primary
WBRNAi00031445Inferred_automaticallyRNAi_primary
Expr_patternExpr1026303
Expr1033995
Expr1149550
Expr2011097
Expr2029333
Drives_constructWBCnstr00032409
Construct_productWBCnstr00032409
Regulate_expr_clusterWBPaper00055896:drsh-1(ok369)_downregulated
WBPaper00055896:drsh-1(ok369)_upregulated
Microarray_results (25)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032097:CGH-1-associated-mRNA
WBPaper00037682:sma-2_sma-4_downregulated
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00041071:spe-44_upregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00045521:Oogenic
WBPaper00045571:germline-ablation_downregulated
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049159:Microwave_upregulated_adult
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00049954:BPS_downregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050743:elli-1(sam-3)_upregulated
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051039:germline_enriched
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:stavudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055648:germline_expressed
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:SGP_biased
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057154:HeatShock_upregulated_miRNA-target
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059739:hira-1(gk835598)_upregulated_L4
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061340:M1_parent
WBPaper00061340:Neuroblast_ADF_AWB
WBPaper00061340:Neuroblast_ASG_AWA
WBPaper00061340:Neuroblast_AVG_RIR
WBPaper00061340:Neuroblast_AWC_SAAVx
WBPaper00061340:Neuroblast_M2_M3
WBPaper00061340:Parent_of_exc_duct_pore_DB_1_3
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:dpy-26-B0205.1
WBPaper00061527:let-99_22121-B0238.9_11154
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_2
WBPaper00005124:estrogen_10-5M_regulated
WBPaper00025032:cluster_53
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00028482:PA14_upregulated
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031184:acrylamide_upregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00034739:N2moreDR1350
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00040184:hcf-1up_sir-2.1up_daf-2nc
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041002:HF_11d_0.2mM_Down
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053688:E.faecium_upregulated
[cgc5767]:cluster_49
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(41_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (80)
WBProcessWBbiopr:00000057
WBbiopr:00000081
Map_infoMapIPosition3.89894Error0.002899
PositivePositive_cloneF26E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4838
4802
4721
Pseudo_map_position
Reference (22)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene