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WormBase Tree Display for Gene: WBGene00008336

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Name Class

WBGene00008336SMapS_parentSequenceC55A6
IdentityVersion1
NameSequence_nameC55A6.7
Molecular_nameC55A6.7
C55A6.7.1
CE09004
Other_nameCELE_C55A6.7Accession_evidenceNDBBX284605
Public_nameC55A6.7
DB_infoDatabaseAceViewgene5M2
WormQTLgeneWBGene00008336
WormFluxgeneWBGene00008336
NDBlocus_tagCELE_C55A6.7
PanthergeneCAEEL|WormBase=WBGene00008336|UniProtKB=P90781
familyPTHR43544
NCBIgene183836
RefSeqproteinNM_073523.6
TREEFAMTREEFAM_IDTF314888
TrEMBLUniProtAccP90781
UniProt_GCRPUniProtAccP90781
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (15)
RNASeq_FPKM (74)
GO_annotation00049033
00049034
00049035
00049036
Contained_in_operonCEOP5292
Ortholog (72)
Paralog (22)
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Involved in defense response to Gram-negative bacterium and innate immune response. Predicted to be located in cytoplasm. Is an ortholog of human CBR3 (carbonyl reductase 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC55A6.7
Corresponding_transcriptC55A6.7.1
Other_sequenceTcol_isotig12589
Tcol_isotig04529
Tcol_isotig04528
Tcol_isotig04527
CBC08136_1
Tcol_isotig04526
Dviv_isotig27386
Associated_featureWBsf653125
WBsf234550
Experimental_infoRNAi_resultWBRNAi00012433Inferred_automaticallyRNAi_primary
WBRNAi00065101Inferred_automaticallyRNAi_primary
WBRNAi00030175Inferred_automaticallyRNAi_primary
WBRNAi00043215Inferred_automaticallyRNAi_primary
Expr_pattern (5)
Drives_constructWBCnstr00033043
Construct_productWBCnstr00033043
Microarray_results (16)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032425:up_in_lin-35
WBPaper00037682:sma-2_sma-4_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:intestine_CoreEnriched
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040560:hpl-2_embryo_upregulated
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00041075:hcf-1(-)_skn-1(+)_upregulated
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_upregulated_L3
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045521:Spermatogenic
WBPaper00045774:clk-1_upregulated
WBPaper00046121:endoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048611:MnCl2_downregulated
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049334:CE_intestine_enriched
WBPaper00049484:elt-2(RNAi)_downregulated_L4
WBPaper00049498:npr-1(ur89)_regulated_7
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053599:female_vs_male_downregulated
WBPaper00053792:Ochrobactrum_upregulated
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056161:male_enriched_siRNA
WBPaper00056169:rrf-3(pk1426)_downregulated_L3
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00057265:metaformin_upregulated_OP50
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061527:F54D5.3_7003-F54D5.3_7004
WBPaper00061651:Coelomocyte_enriched
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062456:doxycycline_upregulated_CB4856_protein
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
WBPaper00064532:pals-22(jy3)_downregulated
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065841:12_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4386_cluster_3_5
cgc4489_group_20
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00026952:class_F
WBPaper00026980:intestine_enriched
WBPaper00028482:PA14_upregulated
WBPaper00031003:hlh_1_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032165:differentially_expressed_with_age_medoid_4
WBPaper00032948:StarveUp2
WBPaper00035560:ahr-1_upregulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036123:Fluoranthene_regulated
WBPaper00036286:Pattern_I
WBPaper00037695:LD_3-day
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00039866:SAM_daf-19_downregulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040426:CYD-1_CDK-4_downregulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_downregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
WBPaper00053550:daf-19(m86)_downregulated_L1
[cgc6390]:Cluster_D
[cgc6390]:mixed_spermatogenesis-somatic
Interaction (52)
Map_infoPositivePositive_cloneC55A6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV3.18635
ReferenceWBPaper00028482
WBPaper00059839
WBPaper00062388
MethodGene