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WormBase Tree Display for Gene: WBGene00003651

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Name Class

WBGene00003651EvidencePaper_evidenceWBPaper00003416
SMapS_parentSequenceW01D2
IdentityVersion1
NameCGC_namenhr-61Person_evidenceWBPerson600
Sequence_nameW01D2.2
Molecular_name (12)
Other_nameCELE_W01D2.2Accession_evidenceNDBBX284602
Public_namenhr-61
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (8)
Molecular_infoCorresponding_CDSW01D2.2a
W01D2.2b
W01D2.2c
W01D2.2d
Corresponding_transcriptW01D2.2a.1
W01D2.2b.1
W01D2.2c.1
W01D2.2d.1
Other_sequenceCBC11329_1
CRC10387_1
CR00295
HBC21573_1
FD514887.1
CSC01266_1
CR10767
CBC08583_1
CRC04906_1
EX910075.1
Associated_feature (27)
Transcription_factorWBTranscriptionFactor000344
Experimental_infoRNAi_result (17)
Expr_patternExpr1012033
Expr1031692
Expr1158069
Expr2014212
Expr2032453
Microarray_results (35)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037682:sma-2_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00045390:tunicamycin_downregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_upregulated
WBPaper00048952:glucose_repressed
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:alovudine_72h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053810:sod-2(ok1030)_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055648:male-vas-deferens_expressed
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_L2
WBPaper00056218:daf-16(mu86)_upregulated_Day5
WBPaper00056218:daf-16(mu86)_upregulated_Day7
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059490:dcr-1(m9375)_upregulated
WBPaper00060084:cco-1(RNAi)_upregulated_N2
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060871:M.humicola-extract_1h_regulated
WBPaper00060909:atfs-1(et18)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:ALN
WBPaper00061340:AMso
WBPaper00061340:Arcade_cell_anterior_and_posterior
WBPaper00061340:hyp1_hyp2
WBPaper00061340:ILsh_OLLsh_OLQsh
WBPaper00061340:Pharyngeal_marginal_cell
WBPaper00061340:PLM
WBPaper00061340:T
WBPaper00061341:28C_48h_upregulated
WBPaper00061527:K12H6.6_1575-C23H4.6
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:etr-1(lq61)_downregulated
WBPaper00062325:etr-1(lq61)_upregulated
WBPaper00062520:qui-1(db104)_upregulated
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064315:mes-3(bn199)_downregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064716:paraquat_upregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066085:sin-3(syb2172)_downregulated
WBPaper00066118:cyclobutrifluram_upregulated
WBPaper00066204:CdCl2_upregulated_mRNA
cgc4489_group_20
WBPaper00025032:cluster_74
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026980:intestine_enriched
WBPaper00032948:StarveUp2
WBPaper00034757:up_by_oxidative_stress
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00036123:Atrazine_regulated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040184:hcf-1up_sir-2.1up_daf-2nc
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:Q50_down
WBPaper00040963:Q200_down
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:daf-16_fasting_upregulated
WBPaper00041960:kgb-1_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042128:gei-8(ok1671)_upregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00055899:nitroguanidine_regulated
WBPaper00056330:mrps-5(RNAi)_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
InteractionWBInteraction000031338
WBInteraction000511497
WBInteraction000525704
WBInteraction000526920
WBInteraction000534427
Map_infoMapIIPosition23.5414Error0.019348
PositivePositive_cloneW01D2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4193
Pseudo_map_position
ReferenceWBPaper00027309
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene