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WormBase Tree Display for Gene: WBGene00003234

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Name Class

WBGene00003234SMapS_parentSequenceY56A3A
IdentityVersion1
NameCGC_namemif-1
Sequence_nameY56A3A.3
Molecular_nameY56A3A.3
Y56A3A.3.1
CE22574
Other_nameCELE_Y56A3A.3Accession_evidenceNDBBX284603
Public_namemif-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:31WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmif
Allele (48)
Strain (3)
RNASeq_FPKM (74)
GO_annotation00098669
00098670
00098671
00098672
00098673
00098674
00098675
00098676
00098677
Ortholog (44)
ParalogWBGene00003236Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003235Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003237Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable cytokine activity and phenylpyruvate tautomerase activity. Predicted to be involved in signal transduction. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); cystic fibrosis; and lung disease (multiple). Is an ortholog of human MIF (macrophage migration inhibitory factor).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (12)
Molecular_infoCorresponding_CDSY56A3A.3
Corresponding_transcriptY56A3A.3.1
Other_sequenceOden_isotig18271
Oden_isotig10765
Oden_isotig10763
CJC07130_1
Oden_isotig10766
CBC06783_1
Oden_isotig10764
Associated_featureWBsf645640
WBsf994508
WBsf994509
WBsf1016092
WBsf1016093
WBsf225866
WBsf225867
Experimental_infoRNAi_resultWBRNAi00021078Inferred_automaticallyRNAi_primary
WBRNAi00037547Inferred_automaticallyRNAi_primary
WBRNAi00006878Inferred_automaticallyRNAi_primary
WBRNAi00076830Inferred_automaticallyRNAi_primary
WBRNAi00057597Inferred_automaticallyRNAi_primary
Expr_patternExpr1725
Expr1730
Expr1020321
Expr1031530
Expr1161014
Expr2013556
Expr2031789
AntibodyWBAntibody00002460
Microarray_results (20)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00037946:LIN-39_interacting
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_upregulated_HeatShock
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_upregulated_protein
WBPaper00048923:Aging_regulated
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:ASER-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053321:embryo-to-L1_upregulated_WT_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00057140:pptr-1(tm3103)_downregulated
WBPaper00057288:Cold_upregulated_transcript
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060458:rnf-5(tm794)_regulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
WBPaper00061340:pm8
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:cfz-2_18944-cfz-2_2268
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062056:lin-15B(n744)_downregulated
WBPaper00062056:lin-37(n758)_downregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064769:him-17(me24)_upregulated
cgc4489_group_12
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Embryo_A_Class
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00032948:StarveUp3
WBPaper00036123:Atrazine_regulated
WBPaper00037695:LD_3-day
WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
InteractionWBInteraction000122768
WBInteraction000158963
WBInteraction000158964
WBInteraction000158965
WBInteraction000169494
WBInteraction000264815
WBInteraction000288375
WBInteraction000388351
WBInteraction000557788
WBInteraction000580159
Map_infoMapIIIPosition13.2759Error0.003071
PositivePositive_cloneY56A3AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005003
WBPaper00011628
WBPaper00038491
WBPaper00050454
WBPaper00055090
WBPaper00056134
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene