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WormBase Tree Display for Gene: WBGene00001681

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Name Class

WBGene00001681SMapS_parentSequenceK02A4
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classgpc
Allele (57)
StrainWBStrain00022692
WBStrain00028937
RNASeq_FPKM (74)
GO_annotation (13)
Ortholog (60)
ParalogWBGene00001682Caenorhabditis elegansFrom_analysisTreeFam
Structured_description (2)
Molecular_infoCorresponding_CDSK02A4.2
Corresponding_transcriptK02A4.2.1
K02A4.2.2
K02A4.2.3
Other_sequence (11)
Associated_featureWBsf718735
WBsf1007456
WBsf1007457
WBsf1024142
WBsf1024143
Experimental_infoRNAi_resultWBRNAi00033844Inferred_automaticallyRNAi_primary
WBRNAi00049655Inferred_automaticallyRNAi_primary
WBRNAi00004987Inferred_automaticallyRNAi_primary
WBRNAi00078844Inferred_automaticallyRNAi_primary
WBRNAi00078842Inferred_automaticallyRNAi_primary
WBRNAi00016425Inferred_automaticallyRNAi_primary
Expr_patternChronogram1810
Expr1829
Expr6304
Expr8523
Expr8524
Expr15376
Expr1021863
Expr1153381
Expr2012201
Expr2030437
Drives_construct (11)
Construct_productWBCnstr00000548
WBCnstr00000549
WBCnstr00000550
WBCnstr00000551
WBCnstr00001697
WBCnstr00013345
WBCnstr00036775
Microarray_results (29)
Expression_clusterWBPaper00029359_1166
WBPaper00029359_1194
WBPaper00029359_1197
WBPaper00029359_1240
WBPaper00029359_1243
WBPaper00029359_1291
WBPaper00029359_1336
WBPaper00029359_1546
WBPaper00029359_1549
WBPaper00029359_1557
WBPaper00029359_1599
WBPaper00032976:dosage_compensated_genes
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037682:sma-2_sma-4_upregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_larva_enriched
WBPaper00037950:all-neurons_larva_SelectivelyEnriched
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045390:tunicamycin_downregulated
WBPaper00045390:ubc-9(RNAi)_downregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051437:Cit-SPIONs_downregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055354:Psora_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055648:male-CEM-neurons_expressed
WBPaper00055648:nerve-ring_expressed
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056826:hmc_biased
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059763:neuron_expressed
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:ADF
WBPaper00061340:ADF_AWB
WBPaper00061340:ASH
WBPaper00061340:ASJ
WBPaper00061340:ASK
WBPaper00061340:AWA
WBPaper00061340:AWC
WBPaper00061340:hmc
WBPaper00061340:Neuroblast_ADF_AWB
WBPaper00061341:28C_24h_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:xbx-3-DH11.5_20397
WBPaper00061651:ADL_enriched
WBPaper00061651:AFD_enriched
WBPaper00061651:ASH_enriched
WBPaper00061651:ASI_enriched
WBPaper00061651:ASJ_enriched
WBPaper00061651:AWA_enriched
WBPaper00061651:AWB_enriched
WBPaper00061651:AWC_OFF_enriched
WBPaper00061651:AWC_ON_enriched
WBPaper00061651:hmc_enriched
WBPaper00061651:PHA_enriched
WBPaper00061651:PHB_enriched
WBPaper00061651:PVW_enriched
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064509:static-magnetic-field_downregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065158:AFD_enriched
WBPaper00065258:anchor-cell_enriched
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:35_0
WBPaper00065841:35_1
WBPaper00065841:35_2
WBPaper00065841:35_3
WBPaper00065841:35_4
WBPaper00065841:47_0
WBPaper00065841:47_1
WBPaper00065841:75_0
WBPaper00065841:77_0
WBPaper00065841:84_0
WBPaper00065841:101_0
WBPaper00065841:106_0
WBPaper00065841:110_0
WBPaper00065841:110_1
WBPaper00065841:119_0
WBPaper00065841:121_0
cgc4489_group_13
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00031832:slr-2_regulated
WBPaper00034661:AgNPs_downregulated
WBPaper00034739:N2moreDR1350
WBPaper00036286:Pattern_I
WBPaper00038427:lin-54_embryo_changed
WBPaper00040876:mir-35_downregulated
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00042548:miRISC_enriched
WBPaper00045673:colistin_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
Interaction (30)
Anatomy_functionWBbtf0001
WBbtf1022
Map_infoMapXPosition8.81848Error0.13549
PositivePositive_cloneK02A4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5508
4215
4883
Pseudo_map_position
Reference (42)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene