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WormBase Tree Display for Gene: WBGene00007659

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Name Class

WBGene00007659SMapS_parentSequenceC17H1
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classpals
Allele (29)
RNASeq_FPKM (74)
GO_annotation00034109
00034110
00034111
OrthologWBGene00271585Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CSP26.g4056Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP40.g862Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g18706Caenorhabditis nigoniFrom_analysisWormBase-Compara
GCK72_018441Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrI_pilon.g2657Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00007657Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00007660Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00012505Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00007131Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007132Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007134Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionInvolved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC17H1.6
Corresponding_transcriptC17H1.6.1
Associated_featureWBsf220478
Experimental_infoRNAi_resultWBRNAi00040849Inferred_automaticallyRNAi_primary
WBRNAi00002983Inferred_automaticallyRNAi_primary
Expr_patternExpr1144896
Expr2014711
Expr2032946
Drives_constructWBCnstr00019406
WBCnstr00033573
Construct_productWBCnstr00033573
AntibodyWBAntibody00003021
Microarray_results (13)
Expression_clusterWBPaper00032425:up_in_lin-35
WBPaper00032528:L3_depleted
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_adult_enriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038168:lin-35_upregulated
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044316:HgCl2_20uM_upregulated
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045401:N.parisii_8h_upregulated
WBPaper00045401:N.parisii_16h_upregulated
WBPaper00045401:N.parisii_30h_upregulated
WBPaper00045401:N.parisii_40h_upregulated
WBPaper00045401:N.parisii_64h_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00049018:ham-3(RNAi)_downregulated
WBPaper00049484:elt-2(RNAi)_upregulated_L4
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050193:lsm-1(tm3585)_upregulated_L3
WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050504:hrp-2(RNAi)_upregulated
WBPaper00051137:N.parisii-virus_upregulated_N2
WBPaper00051137:Orsay-virus_upregulated_N2
WBPaper00051137:Orsay-virus_upregulated_rde-1(ne219)
WBPaper00051371:Orsay-virus-infection_upregulated_rde-1(ne219)
WBPaper00051558:aging_regulated
WBPaper00053020:OrsayVirus-infection_upregulated
WBPaper00053020:OrsayVirus-infection_upregulated_microarray
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055226:adr-1(tm668)_upregulated
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056034:pals-25(jy9)_upregulated
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00059426:SiO2-nanoparticles_downregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00060886:met-2(n4256)_upregulated
WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
WBPaper00061319:pnp-1(jy90)_upregulated
WBPaper00061319:pnp-1(jy121)_upregulated
WBPaper00061340:ABarpaaa_lineage
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:C17H1.6-C17H1.13
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062056:dpl-1(n2994)_upregulated
WBPaper00062056:lin-15B(n744)_upregulated
WBPaper00062056:lin-15B(we23)_upregulated
WBPaper00062056:lin-35(n745)_upregulated
WBPaper00062056:lin-37(n758)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062345:bortezomib_30min_upregulated_N2
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062354:H.zoospora_12h_regulated
WBPaper00063926:chd-7(gk290)_upregulated
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064532:pals-25(jy111)_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065086:JU1400_N.parisii_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065086:N2_N.ironsii_regulated
WBPaper00065086:N2_N.parisii_regulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065995:M.humicola-extract_downregulated_N2
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_9
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00035227:heat_shock_regulated
WBPaper00036286:Pattern_H
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041267:SpaceFlight_Upregulated
WBPaper00041609:hpl-1_hpl-2_upregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00042574:N2_OrsayVirus_upregulated
WBPaper00042574:rde-1(ne219)_OrsayVirus_upregulated
WBPaper00044535:male_upregulated
WBPaper00045401:N.parisii_34h_upregulated_N2
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
InteractionWBInteraction000114808
WBInteraction000119981
WBInteraction000121642
WBInteraction000124594
WBInteraction000124848
WBInteraction000135940
WBInteraction000136280
WBInteraction000137369
WBInteraction000138580
WBInteraction000142876
WBInteraction000143386
WBInteraction000144740
WBInteraction000148630
WBInteraction000149325
WBInteraction000149744
WBInteraction000150008
WBInteraction000150610
WBInteraction000151505
WBInteraction000152977
WBInteraction000156892
WBInteraction000160406
WBInteraction000160633
WBInteraction000165044
WBInteraction000170642
WBInteraction000170855
WBInteraction000171844
WBInteraction000172342
WBInteraction000174876
WBInteraction000177815
WBInteraction000178777
WBInteraction000178889
WBInteraction000182766
WBInteraction000185028
WBInteraction000186362
WBInteraction000187114
WBInteraction000187505
WBInteraction000189665
WBInteraction000192858
WBInteraction000193252
WBInteraction000194011
WBInteraction000194815
WBInteraction000195640
WBInteraction000196605
WBInteraction000196890
WBInteraction000197391
WBInteraction000198237
WBInteraction000199780
WBInteraction000200145
WBInteraction000201868
WBInteraction000203857
WBInteraction000207709
WBInteraction000208032
WBInteraction000208438
WBInteraction000210004
WBInteraction000210286
WBInteraction000210772
WBInteraction000212164
WBInteraction000213567
WBInteraction000216060
WBInteraction000217207
WBInteraction000220776
WBInteraction000220840
WBInteraction000221173
WBInteraction000221344
WBInteraction000221632
WBInteraction000222392
WBInteraction000224202
WBInteraction000225523
WBInteraction000226949
WBInteraction000232338
WBInteraction000233624
WBInteraction000235032
WBInteraction000237417
WBInteraction000237659
WBInteraction000237718
WBInteraction000237724
WBInteraction000238938
WBInteraction000239489
WBInteraction000241774
WBInteraction000245817
WBInteraction000247266
WBInteraction000249503
WBInteraction000250003
WBInteraction000252005
WBInteraction000252592
WBInteraction000254014
WBInteraction000254814
WBInteraction000258003
WBInteraction000258885
WBInteraction000259433
WBInteraction000260527
WBInteraction000264251
WBInteraction000265864
WBInteraction000265945
WBInteraction000268640
WBInteraction000268825
WBInteraction000268853
WBInteraction000270462
WBInteraction000271712
WBInteraction000272003
WBInteraction000275756
WBInteraction000277878
WBInteraction000278086
WBInteraction000279116
WBInteraction000280123
WBInteraction000283648
WBInteraction000283961
WBInteraction000284205
WBInteraction000284927
WBInteraction000285566
WBInteraction000290713
WBInteraction000291636
WBInteraction000292103
WBInteraction000294534
WBInteraction000296343
WBInteraction000297422
WBInteraction000300238
WBInteraction000301837
WBInteraction000305248
WBInteraction000305624
WBInteraction000305911
WBInteraction000306416
WBInteraction000306514
WBInteraction000307141
WBInteraction000309018
WBInteraction000310700
WBInteraction000313551
WBInteraction000319514
WBInteraction000320777
WBInteraction000320978
WBInteraction000321412
WBInteraction000326972
WBInteraction000327385
WBInteraction000327838
WBInteraction000330447
WBInteraction000331540
WBInteraction000335197
WBInteraction000338701
WBInteraction000341747
WBInteraction000342802
WBInteraction000343228
WBInteraction000345914
WBInteraction000347689
WBInteraction000351542
WBInteraction000353097
WBInteraction000353258
WBInteraction000354328
WBInteraction000355011
WBInteraction000355062
WBInteraction000356977
WBInteraction000363611
WBInteraction000364953
WBInteraction000369738
WBInteraction000376338
WBInteraction000379858
WBInteraction000386497
WBInteraction000386846
WBInteraction000387344
WBInteraction000394119
WBInteraction000396739
WBInteraction000400074
WBInteraction000400823
WBInteraction000401025
WBInteraction000402440
WBInteraction000403760
WBInteraction000406484
WBInteraction000409568
WBInteraction000411170
WBInteraction000415446
WBInteraction000416036
WBInteraction000418063
WBInteraction000422025
WBInteraction000430321
WBInteraction000431469
WBInteraction000433140
WBInteraction000435674
WBInteraction000440238
WBInteraction000444949
WBInteraction000456181
WBInteraction000456627
WBInteraction000467576
WBInteraction000543597
WBInteraction000543599
WBInteraction000543600
WBInteraction000543601
WBInteraction000543602
WBInteraction000543607
WBInteraction000543608
WBInteraction000543609
WBInteraction000543610
WBInteraction000543611
Map_infoMapIPosition17.2222
PositivePositive_cloneC17H1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (13)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene