WormBase Tree Display for Gene: WBGene00000445

WBGene00000445 SMap: S_parent: Sequence: F29F11
  Identity: Version: 2
    Name: CGC_name: ceh-22 Person_evidence: WBPerson83
      Sequence_name: F29F11.5
      Molecular_name (15)
      Other_name: sys-3 Paper_evidence: WBPaper00027082
          Person_evidence: WBPerson320
        CELE_F29F11.5 Accession_evidence: NDB BX284605
      Public_name: ceh-22
    DB_info: Database: WormQTL gene WBGene00000445
        SignaLink protein WBGene00000445
        WormFlux gene WBGene00000445
        NDB locus_tag CELE_F29F11.5
        Panther gene CAEEL|WormBase=WBGene00000445|UniProtKB=P41936
          family PTHR24340
        NCBI gene 179485
        RefSeq protein NM_001083274.3
            NM_001356739.4
            NM_001083275.4
            NM_001083273.4
            NM_001356738.3
        SwissProt UniProtAcc P41936
        TrEMBL UniProtAcc A0A2C9C3N2
            A0A2C9C312
        UniProt_GCRP UniProtAcc P41936
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 04 Dec 2006 14:52:18 WBPerson1847 Event: Acquires_merge: WBGene00007040
              Name_change: Other_name: sys-3
      Acquires_merge: WBGene00007040
    Status: Live
  Gene_info (11)
  Disease_info: Experimental_model: DOID:162 Homo sapiens Paper_evidence: WBPaper00060633
          Curator_confirmed: WBPerson324
          Date_last_updated: 24 Jun 2021 00:00:00
  Models_disease_asserted: WBDOannot00000949
    WBDOannot00000954
    WBDOannot00000961
    WBDOannot00000962
  Molecular_info: Corresponding_CDS: F29F11.5a
      F29F11.5b
      F29F11.5c
      F29F11.5d
      F29F11.5e
    Corresponding_transcript: F29F11.5a.1
      F29F11.5b.1
      F29F11.5c.1
      F29F11.5d.1
      F29F11.5e.1
    Other_sequence: Acan_isotig04736
      Oden_isotig21208
      CBC02288_1
      MI05158
      MIC04433_1
      JI177847.1
    Associated_feature (24)
    Gene_product_binds: WBsf019088
      WBsf047566
      WBsf919536
      WBsf919606
      WBsf977575
      WBsf977577
      WBsf977580
      WBsf977582
      WBsf977583
      WBsf977584
      WBsf977588
      WBsf977590
      WBsf977591
      WBsf977592
      WBsf977593
      WBsf977596
      WBsf977601
      WBsf977603
      WBsf977608
      WBsf977610
      WBsf977614
      WBsf977629
      WBsf977632
      WBsf977638
      WBsf977641
      WBsf977642
      WBsf977643
      WBsf977652
      WBsf977654
      WBsf977656
      WBsf977659
      WBsf977663
      WBsf977664
      WBsf977665
      WBsf977671
      WBsf977677
      WBsf977680
      WBsf977685
      WBsf977686
      WBsf977687
      WBsf977689
      WBsf977693
      WBsf977699
      WBsf977700
      WBsf977701
      WBsf977706
      WBsf977711
      WBsf977725
      WBsf977727
      WBsf977728
      WBsf977729
      WBsf977731
      WBsf977734
      WBsf977738
      WBsf977747
      WBsf977749
      WBsf977750
      WBsf977753
      WBsf977754
      WBsf977757
      WBsf977766
      WBsf977767
      WBsf977768
      WBsf977770
      WBsf977775
      WBsf977777
      WBsf977778
      WBsf977780
      WBsf977781
      WBsf977785
      WBsf977788
      WBsf977790
      WBsf977798
      WBsf977800
      WBsf977804
      WBsf977806
      WBsf977810
      WBsf977812
      WBsf977813
      WBsf977814
      WBsf977817
      WBsf977818
      WBsf977822
      WBsf977832
      WBsf977833
      WBsf977839
      WBsf977840
      WBsf977843
      WBsf977847
      WBsf977849
      WBsf977852
      WBsf977855
      WBsf977856
      WBsf977860
      WBsf977866
      WBsf977868
      WBsf977873
      WBsf977874
      WBsf977875
      WBsf977876
      WBsf977881
      WBsf977882
      WBsf977885
      WBsf977886
      WBsf977889
      WBsf977890
      WBsf977893
      WBsf977898
      WBsf977902
      WBsf977905
      WBsf977910
      WBsf977911
      WBsf977912
      WBsf977913
      WBsf977917
      WBsf977918
      WBsf977919
      WBsf977920
      WBsf977921
      WBsf977922
      WBsf977926
      WBsf977927
      WBsf977928
      WBsf977931
      WBsf977934
      WBsf977938
      WBsf977939
      WBsf977940
      WBsf977941
      WBsf977942
      WBsf977943
      WBsf977944
      WBsf977946
      WBsf977947
      WBsf977948
    Transcription_factor: WBTranscriptionFactor000061
  Experimental_info: RNAi_result: WBRNAi00071562 Inferred_automatically: RNAi_primary
      WBRNAi00014111 Inferred_automatically: RNAi_primary
      WBRNAi00031582 Inferred_automatically: RNAi_primary
      WBRNAi00115657 Inferred_automatically: RNAi_primary
      WBRNAi00027310 Inferred_automatically: RNAi_primary
      WBRNAi00069884 Inferred_automatically: RNAi_primary
      WBRNAi00025316 Inferred_automatically: RNAi_primary
      WBRNAi00045934 Inferred_automatically: RNAi_primary
    Expr_pattern (23)
    Drives_construct (18)
    Construct_product (13)
    Antibody: WBAntibody00000082
      WBAntibody00000083
    Microarray_results (30)
    Expression_cluster: WBPaper00024505:pharyngeal_enriched
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040420:ALM_PLM_enriched
      WBPaper00041222:unc-120(st364)_downregulated
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044260:nicotic-acid_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(gk119)_upregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045420:fertilization_upregulated_transcript
      WBPaper00046741:Garlic-Extract_upregulated_mRNA
      WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
      WBPaper00048690:male-Z1-Z4-daughter_enriched
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00051352:Long-Term-Association-Memory_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056167:Cry5B_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:skn-1(lax188)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060909:atfs-1(et18)_downregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:Pharyngeal_marginal_cell
      WBPaper00061340:pm1_pm2
      WBPaper00061340:pm3_pm4_pm5
      WBPaper00061340:pm7
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061527:ceh-22_3981-inx-6
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:etr-1(lq61)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065029:cadmium_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065560:E.coli-HB101_downregulated_F3
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:24_0
      WBPaper00065841:24_1
      WBPaper00065841:57_0
      WBPaper00065841:68_0
      WBPaper00065841:68_1
      WBPaper00065841:120_0
      WBPaper00065841:130_0
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4386_cluster_6_5
      cgc4489_group_2
      WBPaper00025032:cluster_18
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00034739:N2lessDR1350
      WBPaper00036123:Cadmium_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
    Interaction (111)
    WBProcess: WBbiopr:00000073
      WBbiopr:00000114
  Map_info: Map: V Position: 2.70908 Error: 0.00321
    Well_ordered
    Positive: Positive_clone: F29F11 Inferred_automatically: From sequence, transcript, pseudogene data
        Y24E3
        Y33F10
        Y59H10
        Y61D5
    Mapping_data: Multi_point: 3789
      Pos_neg_data: 8351
        8352
        8353
        8354
        8355
  Reference (88)
  Method: Gene