WormBase Tree Display for Gene: WBGene00005010

WBGene00005010 Evidence: Paper_evidence: WBPaper00005525
  SMap: S_parent: Sequence: Y40B1B
  Identity: Version: 1
    Name: CGC_name: spr-5 Person_evidence: WBPerson220
      Sequence_name: Y40B1B.6
      Molecular_name: Y40B1B.6
        Y40B1B.6.1
        CE20240
        Y40B1B.6.2
      Other_name: CELE_Y40B1B.6 Accession_evidence: NDB BX284601
      Public_name: spr-5
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:37 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spr
    Allele: WBVar00000639
      WBVar02148888
      WBVar00000630
      WBVar00685442
      WBVar00685443
      WBVar00685444
      WBVar00685445
      WBVar00685446
      WBVar00685447
      WBVar00685448
      WBVar02128899
      WBVar00685449
      WBVar00685450
      WBVar00160872
      WBVar02128900
      WBVar00685451
      WBVar00160873
      WBVar00685452
      WBVar00160874
      WBVar00685453
      WBVar00160875
      WBVar00685454
      WBVar00160876
      WBVar00685455
      WBVar00160877
      WBVar00685456
      WBVar00160878
      WBVar00160879
      WBVar00685457
      WBVar00160880
      WBVar00685458
      WBVar00685459
      WBVar00160881
      WBVar00160882
      WBVar00685460
      WBVar00685461
      WBVar00160883
      WBVar00685462
      WBVar00685463
      WBVar00685464
      WBVar00685465
      WBVar00685466
      WBVar00685467
      WBVar00685468
      WBVar00685469
      WBVar00307560
      WBVar00307561
      WBVar00307562
      WBVar01499739
      WBVar02002404
      WBVar02002405
      WBVar02002406
      WBVar01473622
      WBVar01473623
      WBVar01473624
      WBVar01352356
      WBVar01352367
      WBVar01352379
      WBVar01494420
      WBVar02114583
      WBVar01914939
      WBVar01914940
      WBVar01958573
      WBVar01958576
      WBVar00350356
      WBVar00350357
      WBVar00350358
      WBVar00350359
      WBVar00350360
      WBVar00350361
      WBVar00350362
      WBVar00350363
      WBVar00350364
      WBVar00350365
      WBVar00350366
      WBVar00350367
      WBVar01910376
      WBVar00350368
      WBVar00350369
      WBVar00350370
      WBVar01557089
      WBVar01557090
      WBVar00350371
      WBVar02066604
      WBVar01557091
      WBVar00350372
      WBVar02066605
      WBVar01489308
      WBVar00350373
      WBVar01557092
      WBVar00350374
      WBVar01557093
      WBVar02066606
      WBVar00000227
      WBVar01557094
      WBVar02066607
      WBVar00350375
      WBVar01557095
      WBVar00350376
      WBVar02066608
      WBVar00317341
      WBVar01434465
      WBVar01557096
      WBVar02066609
      WBVar01557097
      WBVar01434466
      WBVar01557098
      WBVar01434467
      WBVar01557099
      WBVar01434468
      WBVar02056825
      WBVar02056826
      WBVar01557100
      WBVar01434469
      WBVar01557101
      WBVar01232240
      WBVar01499999
      WBVar01501842
      WBVar01501843
      WBVar01232252
      WBVar01501844
      WBVar01835378
      WBVar01501845
      WBVar01232263
      WBVar01232274
      WBVar01232285
      WBVar00000619
      WBVar01890595
      WBVar01890596
      WBVar00000626
      WBVar01890597
      WBVar00000628
      WBVar01890598
      WBVar01665078
      WBVar01574494
      WBVar00000635
      WBVar01890599
      WBVar01665079
      WBVar01890600
      WBVar01890601
      WBVar01665080
      WBVar01890602
      WBVar01665081
      WBVar01890603
      WBVar01665082
      WBVar01890604
      WBVar01665083
      WBVar01665084
      WBVar01476477
      WBVar01476478
      WBVar00685411
      WBVar00685412
      WBVar00685413
      WBVar00685414
      WBVar00685415
      WBVar00685416
      WBVar00685417
      WBVar00685418
      WBVar00685419
      WBVar00685420
      WBVar01948194
      WBVar00685421
      WBVar01948195
      WBVar00685422
      WBVar01948196
      WBVar00685423
      WBVar01948197
      WBVar00685424
      WBVar01948198
      WBVar00685425
      WBVar01948199
      WBVar00685426
      WBVar00685427
      WBVar01948200
      WBVar00685428
      WBVar01948201
      WBVar00685429
      WBVar01948202
      WBVar00685430
      WBVar01850636
      WBVar01948203
      WBVar00685431
      WBVar01850637
      WBVar01948204
      WBVar00685432
      WBVar01948205
      WBVar01850638
      WBVar01850639
      WBVar00685433
      WBVar01850640
      WBVar00685434
      WBVar01850641
      WBVar00685435
      WBVar00301641
      WBVar01850642
      WBVar00685436
      WBVar00685437
      WBVar00685438
      WBVar00685439
      WBVar00685440
      WBVar00685441
      WBVar02116733
    Strain: WBStrain00003899
      WBStrain00005680
      WBStrain00005722
    RNASeq_FPKM (74)
    GO_annotation (22)
    Contained_in_operon: CEOP1700
    Ortholog (42)
    Paralog: WBGene00000137 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000138 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011615 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00000139 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016061 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019154 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description (2)
  Disease_info: Potential_model: DOID:986 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:29079)
      DOID:8947 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:29079)
      DOID:684 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:29079)
      DOID:1612 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:29079)
  Molecular_info: Corresponding_CDS: Y40B1B.6
    Corresponding_transcript: Y40B1B.6.1
      Y40B1B.6.2
    Other_sequence (12)
    Associated_feature: WBsf985868
      WBsf1011076
      WBsf218735
      WBsf218736
  Experimental_info: RNAi_result: WBRNAi00004611 Inferred_automatically: RNAi_primary
      WBRNAi00089593 Inferred_automatically: RNAi_primary
      WBRNAi00091519 Inferred_automatically: RNAi_primary
      WBRNAi00022756 Inferred_automatically: RNAi_primary
      WBRNAi00089623 Inferred_automatically: RNAi_primary
      WBRNAi00056320 Inferred_automatically: RNAi_primary
      WBRNAi00036977 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2274
      Expr8609
      Expr1015205
      Expr1032494
      Expr1159808
      Expr2016092
      Expr2034327
    Construct_product: WBCnstr00020449
      WBCnstr00039711
    Regulate_expr_cluster: WBPaper00033101:spr-5_regulated
      WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated
      WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
      WBPaper00060886:spr-5(by101)_downregulated
      WBPaper00060886:spr-5(by101)_upregulated
    Antibody: WBAntibody00001911
      WBAntibody00001912
    Microarray_results (22)
    Expression_cluster (100)
    Interaction (81)
    WBProcess: WBbiopr:00000014
  Map_info: Map: I Position: 20.7399 Error: 0.137006
    Positive: Positive_clone: Y40B1B Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4694
        5003
        5554
    Pseudo_map_position
  Reference (63)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene