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WormBase Tree Display for Gene: WBGene00011554

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Name Class

WBGene00011554SMapS_parentSequenceT07A5
IdentityVersion2
NameSequence_nameT07A5.1
Molecular_nameT07A5.1
T07A5.1.1
CE41335
Other_nameCELE_T07A5.1Accession_evidenceNDBBX284603
Public_nameT07A5.1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 Jun 2007 16:25:29WBPerson1983EventSplit_intoWBGene00045475
Split_intoWBGene00045475
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01500260
WBVar02141093
WBVar00178496
WBVar01507472
WBVar00178497
WBVar00178498
WBVar02069710
WBVar02132627
WBVar00855676
WBVar00855677
WBVar00855678
WBVar00855679
WBVar00855680
WBVar00855681
WBVar00855682
WBVar00855683
WBVar00855684
WBVar00855685
WBVar00855686
WBVar01542240
WBVar00855687
WBVar00855688
WBVar00855689
WBVar00855690
WBVar00855691
WBVar00855692
WBVar00855693
WBVar00855694
WBVar01499774
WBVar02141169
WBVar01409232
WBVar01447988
WBVar00234051
WBVar01904132
WBVar00407079
WBVar00407080
WBVar00407081
WBVar00407082
WBVar00407083
WBVar01474438
WBVar00564969
WBVar00564970
WBVar00564972
WBVar00564973
WBVar01397230
RNASeq_FPKM (74)
GO_annotation00056025
00056026
00056027
00056028
Ortholog (42)
ParalogWBGene00020307Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020924Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020309Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00017877Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021249Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020308Caenorhabditis elegansFrom_analysisTreeFam
WBGene00020927Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045475Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050560Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0050559Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110443Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:9884Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0112379Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110296Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110444Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110284Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
Molecular_infoCorresponding_CDST07A5.1
Corresponding_CDS_historyT07A5.1:wp178
Corresponding_transcriptT07A5.1.1
Other_sequenceDviv_isotig16807
CRC01648_1
CR04677
Associated_featureWBsf227434
Experimental_infoRNAi_resultWBRNAi00006386Inferred_automaticallyRNAi_primary
WBRNAi00052693Inferred_automaticallyRNAi_primary
Expr_patternExpr1020077
Expr1156299
Expr2005948
Expr2024165
Drives_constructWBCnstr00030565
Construct_productWBCnstr00030565
Microarray_results (12)
Expression_clusterWBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00040560:hpl-2_L3_downregulated
WBPaper00042477:rsr-2(RNAi)_upregulated_RNAseq
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045520:V.alginolyticus_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048611:MnCl2_downregulated
WBPaper00048923:Aging_regulated
WBPaper00049377:MWCNT_upregulated
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053771:up_at_24h-NaCl
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-25(jy9)_downregulated
WBPaper00056167:Cry5B_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056586:mpk-2(ok219)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
WBPaper00057068:numr-1(RNAi)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058711:paraquat_upregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058948:PA14_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059253:stearic-acid_downregulated
WBPaper00059253:sucrose_downregulated
WBPaper00059253:sucrose_stearic-acid_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059426:SiO2-nanoparticles_upregulated
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061340:Glia
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:R12E2.14_75-R12E2.15
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_downregulated
WBPaper00061952:daf-18(nr2037)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_downregulated
WBPaper00062193:daf-16(RNAi)_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064494:postdauer_downregulated_WholeAnimal
WBPaper00064727:daf-2(e1370)_upregulated
WBPaper00064769:him-17(me24)_upregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065841:0_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00025141:N2_Expressed_Genes
WBPaper00027111:rrf-3(pk1426)_downregulated
WBPaper00034739:N2moreDR1350
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035891:zip-2(RNAi)_downregulated
WBPaper00036286:Pattern_C
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040963:Q50_up
WBPaper00040963:Q100_up
WBPaper00040963:Q200_up
WBPaper00041211:RPW-24_Up
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00044535:male_upregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00048989:eat-2(ad465)_downregulated_in-DMSO
WBPaper00057098:SiO2-nanoparticles_downregulated
Map_infoPositivePositive_cloneT07A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII2.29338
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00062840
WBPaper00065080
MethodGene