WormBase Tree Display for Gene: WBGene00020747

WBGene00020747 SMap: S_parent: Sequence: T24A6
  Identity: Version: 1
    Name: Sequence_name: T24A6.7
      Molecular_name: T24A6.7
        T24A6.7.1
        CE14136
      Other_name: CELE_T24A6.7 Accession_evidence: NDB BX284605
      Public_name: T24A6.7
    DB_info: Database: AceView gene 5E1
        WormQTL gene WBGene00020747
        WormFlux gene WBGene00020747
        NDB locus_tag CELE_T24A6.7
        NCBI gene 188825
        RefSeq protein NM_071583.2
        TREEFAM TREEFAM_ID TF316991
        TrEMBL UniProtAcc O61936
        UniProt_GCRP UniProtAcc O61936
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00999455
      WBVar00999456
      WBVar00999457
      WBVar00999458
      WBVar00999459
      WBVar00999460
      WBVar00999461
      WBVar01986407
      WBVar01499528
      WBVar01499167
      WBVar02093200
      WBVar01499740
      WBVar01500129
      WBVar01615948
      WBVar01828289
      WBVar02123282
      WBVar00603412
      WBVar00454182
      WBVar00454183
      WBVar00454184
      WBVar02124044
      WBVar00454185
      WBVar00454186
      WBVar00206482
      WBVar00454187
      WBVar02121470
      WBVar00206483
      WBVar00206484
      WBVar00206485
      WBVar00206486
      WBVar01499483
      WBVar02090577
      WBVar01498943
      WBVar01498944
      WBVar01499496
      WBVar01499316
      WBVar01500066
    RNASeq_FPKM (74)
    Ortholog (26)
    Paralog: WBGene00007440 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00015574 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00016495 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00010436 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012927 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012968 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020052 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in amphid sheath cell; body wall muscle cell; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; eat-2; and npr-1 based on proteomic; microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; procyanidin; and Sodium Chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: NADAR domain; NADAR; and YbiA-like superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T24A6.7
    Corresponding_transcript: T24A6.7.1
  Experimental_info: RNAi_result: WBRNAi00054014 Inferred_automatically: RNAi_primary
      WBRNAi00097962 Inferred_automatically: RNAi_primary
      WBRNAi00019130 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021942
      Expr1157558
      Expr2006433
      Expr2024653
    Drives_construct: WBCnstr00024919
    Construct_product: WBCnstr00024919
    Microarray_results (19)
    Expression_cluster: WBPaper00024245:gst-5-binding_ROS-stressed
      WBPaper00032425:up_in_lin-35
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037682:sma-2_upregulated
      WBPaper00037950:bodywall-muscle_larva_enriched
      WBPaper00037950:GABAergic-motor-neurons_larva_enriched
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_L3_downregulated
      WBPaper00042477:prp-8(RNAi)_upregulated_RNAseq
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044316:CH3HgCl_2.0uM_upregulated
      WBPaper00044316:CH3HgCl_7.5uM_upregulated
      WBPaper00045050:drh-3 (ne4253)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00049001:EVN_enriched
      WBPaper00049489:AMsh-glia_enriched
      WBPaper00049498:npr-1(ur89)_regulated_5
      WBPaper00049905:Age_variant_expression
      WBPaper00050096:P.aeruginosa_upregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050504:hrp-2(RNAi)_upregulated
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00053092:procyanidins_upregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053318:Aging_upregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_upregulated_mRNA
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00054810:deoxynivalenol_upregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055060:flr-1(RNAi)_downregulated
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056275:P.aeruginosa_upregulated
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00058725:sftb-1(cer39)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059253:sucrose_downregulated
      WBPaper00059253:sucrose_stearic-acid_downregulated
      WBPaper00059334:sacy-1(depletion)_regulated
      WBPaper00059754:P.aeruginosa_PA14_upregulated
      WBPaper00059895:wounding_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061340:IL2
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061390:daf-22(ok693)_ascarosides_upregulated
      WBPaper00061527:C10C5.2-Y58A7A.3
      WBPaper00061651:IL2_DV_enriched
      WBPaper00062056:lin-35(n745)_upregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00062354:H.zoospora_12h_regulated
      WBPaper00062456:doxycycline_upregulated_N2_transcript
      WBPaper00062497:xpf-1(tm2842)_upregulated
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00062590:Aging_upregulated_neuron
      WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
      WBPaper00064158:xpo-1(RNAi)_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065841:13_0
      WBPaper00065841:57_0
      WBPaper00065841:57_1
      WBPaper00065945:epidermis-rpoa-2(-)_upregulated_protein
      WBPaper00066204:CdCl2_upregulated_mRNA
      cgc4489_group_18
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00032062:age_regulated_genes
      WBPaper00032165:differentially_expressed_with_age_medoid_2
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035891:PA_induced_zip-2_dependent
      WBPaper00036123:Atrazine_regulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_D
      WBPaper00038304:octr-1_regulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_3h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041960:N2_fasting_upregulated_9hto12h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00044091:Bpseudomallei_induced_2h
      WBPaper00044091:Bpseudomallei_induced_4h
      WBPaper00044091:Bpseudomallei_induced_8h
      WBPaper00044091:Bpseudomallei_induced_12h
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048637:lin-35(n745)_starvation_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_upregulated
    Interaction: WBInteraction000136389
      WBInteraction000139960
      WBInteraction000140371
      WBInteraction000142637
      WBInteraction000148702
      WBInteraction000150501
      WBInteraction000150583
      WBInteraction000151953
      WBInteraction000166642
      WBInteraction000175405
      WBInteraction000175460
      WBInteraction000176439
      WBInteraction000182117
      WBInteraction000182777
      WBInteraction000191984
      WBInteraction000197343
      WBInteraction000198733
      WBInteraction000198764
      WBInteraction000202327
      WBInteraction000204217
      WBInteraction000204862
      WBInteraction000205003
      WBInteraction000205554
      WBInteraction000216722
      WBInteraction000218758
      WBInteraction000220855
      WBInteraction000224735
      WBInteraction000226970
      WBInteraction000228226
      WBInteraction000229654
      WBInteraction000235597
      WBInteraction000237688
      WBInteraction000241498
      WBInteraction000258426
      WBInteraction000258465
      WBInteraction000263118
      WBInteraction000264728
      WBInteraction000278385
      WBInteraction000280922
      WBInteraction000282724
      WBInteraction000285424
      WBInteraction000285985
      WBInteraction000291981
      WBInteraction000295493
      WBInteraction000298480
      WBInteraction000305512
      WBInteraction000306248
      WBInteraction000307736
      WBInteraction000309971
      WBInteraction000311465
      WBInteraction000317205
      WBInteraction000317475
      WBInteraction000322988
      WBInteraction000323158
      WBInteraction000326584
      WBInteraction000327766
      WBInteraction000329401
      WBInteraction000333772
      WBInteraction000335102
      WBInteraction000337455
      WBInteraction000337630
      WBInteraction000340464
      WBInteraction000341950
      WBInteraction000343152
      WBInteraction000346844
      WBInteraction000347466
      WBInteraction000349284
      WBInteraction000353915
      WBInteraction000355984
      WBInteraction000357887
      WBInteraction000366840
      WBInteraction000367467
      WBInteraction000375479
      WBInteraction000377905
      WBInteraction000383776
      WBInteraction000383944
      WBInteraction000387662
      WBInteraction000402856
      WBInteraction000406051
      WBInteraction000407168
      WBInteraction000407371
      WBInteraction000413237
      WBInteraction000420889
      WBInteraction000423826
      WBInteraction000425292
      WBInteraction000427460
      WBInteraction000432509
      WBInteraction000437852
      WBInteraction000437955
      WBInteraction000439082
      WBInteraction000439461
      WBInteraction000441562
      WBInteraction000450088
      WBInteraction000451032
      WBInteraction000455710
      WBInteraction000456121
      WBInteraction000460142
      WBInteraction000461197
      WBInteraction000540090
  Map_info: Positive: Positive_clone: T24A6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -10.296
  Method: Gene