WormBase Tree Display for Gene: WBGene00194737
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| WBGene00194737 | SMap | S_parent | Sequence | Y50D7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y50D7A.13 | |||||||
| Molecular_name | Y50D7A.13a | ||||||||
| Y50D7A.13a.1 | |||||||||
| CE50830 | |||||||||
| Y50D7A.13b | |||||||||
| CE50849 | |||||||||
| Y50D7A.13b.1 | |||||||||
| Other_name | CELE_Y50D7A.13 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y50D7A.13 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00194737 | |||||
| NDB | locus_tag | CELE_Y50D7A.13 | |||||||
| NCBI | gene | 13188188 | |||||||
| RefSeq | protein | NM_001312977.1 | |||||||
| NM_001312976.2 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3ARD1 | |||||||
| A0A0K3AUX6 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3ARD1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 21 Aug 2009 11:07:44 | WBPerson1867 | Event | Created | |||
| 2 | 30 Apr 2015 13:34:49 | WBPerson1983 | Event | Acquires_merge | WBGene00194736 | ||||
| Acquires_merge | WBGene00194736 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (133) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00006987 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00010423 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010524 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012185 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012364 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00016283 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019212 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020646 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in collagen catabolic process and extracellular matrix organization. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; artery disease (multiple); autoimmune disease (multiple); and carcinoma (multiple). Is an ortholog of human MMP2 (matrix metallopeptidase 2); MMP23B (matrix metallopeptidase 23B); and MMP9 (matrix metallopeptidase 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (122) | ||||||||
| Molecular_info | Corresponding_CDS | Y50D7A.13a | |||||||
| Y50D7A.13b | |||||||||
| Corresponding_CDS_history | Y50D7A.13:wp248 | ||||||||
| Corresponding_transcript | Y50D7A.13a.1 | ||||||||
| Y50D7A.13b.1 | |||||||||
| Associated_feature | WBsf650792 | ||||||||
| WBsf991023 | |||||||||
| WBsf991024 | |||||||||
| WBsf991025 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001652 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020835 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1040461 | ||||||||
| Expr1040462 | |||||||||
| Expr1160533 | |||||||||
| Expr1160534 | |||||||||
| Expr2007754 | |||||||||
| Expr2025997 | |||||||||
| Microarray_results | SMD_Y50D7_165.A | ||||||||
| Aff_Y50D7_165.A | |||||||||
| GPL19516_CGZ0047628 | |||||||||
| GPL19516_CGZ0047629 | |||||||||
| GPL21109_Y50D7A.12 | |||||||||
| GPL21109_Y50D7A.13 | |||||||||
| Expression_cluster (42) | |||||||||
| Map_info | Positive | Positive_clone | Y50D7A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -26.9033 | |||||||
| Method | Gene |
