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WormBase Tree Display for Gene: WBGene00155616

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Name Class

WBGene00155616SMapS_parentSequenceCbre_Contig30
IdentityVersion1
NameCGC_nameCbn-unc-18From_analysisInferred_from_orthology
Sequence_nameCBN16891
Molecular_nameCBN16891
CBN16891.1
CN22107
Other_nameCBN16891
Public_nameCbn-unc-18
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002 (11)
WBls:000000412.1515From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
24.303From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
38.5393From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
43.6509From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
44.6611From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
50.8347From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
52.8658From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003838.5959From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
38.8139From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
39.0319From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:000010117.9564From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
18.8898From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00215792
OrthologWBGene00006757Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00020298Caenorhabditis elegansFrom_analysisTreeFam
WBGene00036613Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00051283Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00064553Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00117349Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00135188Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g3312Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4144Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14634Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19990Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2860Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20563Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1698Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17247Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g8806Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20843Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00214.g7185Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_09977.g22391Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-18Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12404Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00373.g10337Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00126Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024825Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04356Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21263Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0209400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00221426Brugia malayiFrom_analysisWormBase-Compara
WBGene00234090Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g19450Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00214490Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00239568Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00273414Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00264659Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290156Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00147637Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00141342Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143109Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147851Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00152678Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161372Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193355Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans unc-18. In C. elegans, unc-18 is involved in chemical synaptic transmission and positive regulation of neurotransmitter secretion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN16891
Corresponding_transcriptCBN16891.1
Other_sequence (67)
Experimental_infoMicroarray_resultsGPL14142_CBN16891_1305-1364_0.938_4_C
GPL14142_CBN16891_1398-1457_0.945_3_B
GPL14142_CBN16891_1589-1648_0.967_1_A
MethodGene