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WormBase Tree Display for Gene: WBGene00193355

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Name Class

WBGene00193355SMapS_parentSequenceCbre_Contig143
IdentityVersion1
NameSequence_nameCBN31390
Molecular_nameCBN31390
CBN31390.1
CN35202
Public_nameCBN31390
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:53WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002 (11)
WBls:00000041.98575From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
3.97151From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000241.68368From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
1.74215From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.09484From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
2.72174From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
2.99247From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000384.08956From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
4.36936From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
4.64915From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (15)
WBls:00001012.02234From_analysisRNASeq.brenneri.total_over_all_stages.control_median
2.20028From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00229308
Ortholog (33)
ParalogWBGene00141342Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00152678Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00161372Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00143109Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147637Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147851Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155616Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans vps-33.2. In C. elegans, vps-33.2 is involved in spermatocyte division.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN31390
Corresponding_transcriptCBN31390.1
Other_sequenceDviv_isotig29676
Oden_isotig27960
Acan_isotig14752
Experimental_infoMicroarray_resultsGPL14142_CBN02617_568-627_0.827_84_C
GPL14142_CBN02617_576-635_0.823_91_A
MethodGene