WormBase Tree Display for Gene: WBGene00141342

WBGene00141342 SMap: S_parent: Sequence: Cbre_Contig749
  Identity: Version: 2
    Name: CGC_name: Cbn-vps-33.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN02617
      Molecular_name: CBN02617
        CBN02617.1
        CN27856
      Public_name: Cbn-vps-33.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-vps-33.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.492274 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.984547 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0.392742 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0.529892 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0.544365 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0.609107 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0.852272 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 0.95166 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        1.03306 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        1.11446 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (12)
      WBls:0000101 0.984547 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.16895 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00204245
    Ortholog (33)
    Paralog: WBGene00152678 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00161372 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00193355 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00143109 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00147637 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00147851 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00155616 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans vps-33.2. In C. elegans, vps-33.2 is involved in spermatocyte division. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN02617
    Corresponding_CDS_history: CBN02617:np197
    Corresponding_transcript: CBN02617.1
    Other_sequence: Tcol_isotig02052
  Experimental_info: Microarray_results: GPL14142_CBN02617_1656-1715_0.908_19_B
  Method: Gene