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WormBase Tree Display for Gene: WBGene00155616

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Name Class

WBGene00155616SMapS_parentSequenceCbre_Contig30
IdentityVersion1
NameCGC_nameCbn-unc-18From_analysisInferred_from_orthology
Sequence_nameCBN16891
Molecular_nameCBN16891
CBN16891.1
CN22107
Other_nameCBN16891
Public_nameCbn-unc-18
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000210.2376From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
14.7226From_analysisRNASeq.brenneri.WBls:0000002.control_mean
16.2721From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
16.5015From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
17.0804From_analysisRNASeq.brenneri.WBls:0000002.control_median
17.6593From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
19.2843From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
19.6699From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
21.3125From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
26.2891From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:000000412.1515From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
24.303From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
38.5393From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
43.6509From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
44.6611From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
50.8347From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
52.8658From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003838.5959From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
38.8139From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
39.0319From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004110.7803From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
11.3299From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
14.8868From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
15.5349From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
18.5428From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
18.8898From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
19.0828From_analysisRNASeq.brenneri.WBls:0000041.control_median
19.2182From_analysisRNASeq.brenneri.WBls:0000041.control_mean
19.2758From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
20.9967From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
22.184From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
26.0979From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
27.2808From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
29.1324From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
31.6743From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
40.8852From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
WBls:000010117.9564From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
18.8898From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00215792
OrthologWBGene00006757Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00020298Caenorhabditis elegansFrom_analysisTreeFam
WBGene00036613Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00051283Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00064553Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00117349Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00135188Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g3312Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4144Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14634Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19990Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2860Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20563Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1698Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17247Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g8806Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20843Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00214.g7185Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_09977.g22391Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-18Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12404Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00373.g10337Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00126Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024825Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04356Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21263Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0209400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00221426Brugia malayiFrom_analysisWormBase-Compara
WBGene00234090Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g19450Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00214490Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00239568Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00273414Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00264659Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290156Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00147637Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00141342Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143109Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147851Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00152678Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161372Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193355Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans unc-18. In C. elegans, unc-18 is involved in chemical synaptic transmission and positive regulation of neurotransmitter secretion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN16891
Corresponding_transcriptCBN16891.1
Other_sequenceFG584102.1
FK807421.1
Acan_isotig20626
XI00463
Acan_isotig03365
Tcir_isotig24839
BXC05950_1
HS00282
CRC04275_1
ES880258.1
Tcir_isotig20824
JI169288.1
ES411457.1
SC00765
EY469400.1
ES880252.1
ES561067.1
FG355872.1
HBC15028_1
CJC18373_1
ACC09517_1
Oden_isotig12932
CRC07039_1
Tcol_isotig04779
FC552916.1
ES570179.1
Tcol_isotig04780
ACC16245_1
HBC00493_1
FC546758.1
Oden_isotig24178
HSC00604_1
CR01301
Oden_isotig12933
Tcol_isotig04778
XIC01192_1
EE724186.1
HC05789
FC551410.1
Oden_isotig24729
FK802737.1
HSC01469
Tcir_isotig06928
FC550352.1
GR979115.1
FG350289.1
FC541454.1
Hbac_isotig00325
HS01379
Acan_isotig03364
EY460228.1
ES410353.1
DN152859.1
Hbac_isotig00324
CR08014
FK802781.1
Dviv_isotig23225
TSC13280_1
EY459696.1
FK805519.1
FK807207.1
Oden_isotig27983
ACC17213_1
EX567052.1
TSC09387_1
HBC01518_1
FC550810.1
Experimental_infoMicroarray_resultsGPL14142_CBN16891_1305-1364_0.938_4_C
GPL14142_CBN16891_1398-1457_0.945_3_B
GPL14142_CBN16891_1589-1648_0.967_1_A
MethodGene