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WormBase Tree Display for Gene: WBGene00144273

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Name Class

WBGene00144273SMapS_parentSequenceCbre_Contig13
IdentityVersion1
NameCGC_nameCbn-unc-49From_analysisInferred_from_orthology
Sequence_nameCBN05548
Molecular_nameCBN05548
CBN05548.1
CN16632
Other_nameCBN05548
Public_nameCbn-unc-49
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-49
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.275167From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.550334From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002416.1029From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
19.6563From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
19.788From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.012From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
22.3909From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:000003811.8182From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
12.4201From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
13.022From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:00001013.8516From_analysisRNASeq.brenneri.total_over_all_stages.control_median
4.75235From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00206734
00206735
00206736
00206737
00206738
00206739
Ortholog (34)
ParalogWBGene00139250Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00157177Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00157438Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00151278Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00138792Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00138845Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00139075Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139080Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139143Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00139571Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00139661Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139702Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00140336Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00140406Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00140979Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141041Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141324Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00141395Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141609Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00141899Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142232Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142428Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143059Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143087Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00143107Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143890Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00144110Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144161Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00144205Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144228Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144426Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00145120Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00145291Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00145921Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146134Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00146335Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146354Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147133Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147718Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147753Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147758Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147844Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147980Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00148482Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149105Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149172Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149252Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149704Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00150338Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00150985Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00151047Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00151456Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152107Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00152462Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152602Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153668Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153946Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153953Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154195Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154215Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154879Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155461Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155698Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155805Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156453Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156787Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156911Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157042Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00157395Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157433Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00157559Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157589Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157870Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158492Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158829Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159346Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159464Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160383Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160421Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160990Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161333Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162467Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162698Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163523Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163765Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00163846Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164276Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164940Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00185108Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190055Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190100Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190110Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190133Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190235Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190325Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190449Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190665Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190745Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190856Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191029Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191168Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191332Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191904Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192145Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192223Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192251Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192268Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192433Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00192500Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192627Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192749Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192846Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00192940Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193606Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193779Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193860Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193924Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194084Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194097Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194106Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194119Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194133Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194337Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194428Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194461Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194971Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00195140Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00219520Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-49. In C. elegans, unc-49 is involved in gamma-aminobutyric acid signaling pathway; locomotory behavior; and regulation of backward locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN05548
Corresponding_transcriptCBN05548.1
Other_sequence (50)
Experimental_infoMicroarray_resultsGPL14142_CBN05548_1516-1575_0.726_142_C
GPL14142_CBN05548_2003-2062_0.793_73_B
GPL14142_CBN05548_2266-2325_0.891_18_A
MethodGene