WormBase Tree Display for Gene: WBGene00192846

WBGene00192846 SMap: S_parent: Sequence: Cbre_Contig73
  Identity: Version: 7
    Name: CGC_name: Cbn-lgc-46.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN30881
      Molecular_name: CBN30881
        CBN30881.1
        CN32705
      Other_name: Cbn-lgc-46 From_analysis: Inferred_from_orthology
      Public_name: Cbn-lgc-46.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-lgc-46
        3 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Cbn-lgc-46.1
                Other_name: Cbn-lgc-46
        4 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Removed
        5 04 Feb 2020 15:43:57 WBPerson1983 Name_change: CGC_name: Cbn-lgc-46.1
        6 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Removed
        7 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbn-lgc-46.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    RNASeq_FPKM: WBls:0000002 0.447248 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0.47126 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.505985 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.564723 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.616438 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0.755825 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        1.07657 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        1.2518 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
      WBls:0000004 0.247004 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.494008 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        3.92698 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        4.6268 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        7.16077 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        7.63438 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        8.73345 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 2.04733 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        2.14158 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        2.23583 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (13)
      WBls:0000101 0.447248 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        0.704011 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00228713
      00228714
      00228715
      00228716
      00228717
      00228718
    Ortholog (28)
    Paralog (128)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-46. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN30881
    Corresponding_transcript: CBN30881.1
    Other_sequence: Dviv_isotig30126
      HBC23422_1
      JI474808.1
      JI463934.1
      JI165507.1
      Tcir_isotig27825
      EX913536.1
      Oden_isotig24619
  Remark: [191001 pad] The CGC name Cbn-lgc-46.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200603 pad] The CGC name Cbn-lgc-46.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene