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WormBase Tree Display for Gene: WBGene00144273

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Name Class

WBGene00144273SMapS_parentSequenceCbre_Contig13
IdentityVersion1
NameCGC_nameCbn-unc-49From_analysisInferred_from_orthology
Sequence_nameCBN05548
Molecular_nameCBN05548
CBN05548.1
CN16632
Other_nameCBN05548
Public_nameCbn-unc-49
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-49
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000213.0033From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.92162From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
5.31924From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
5.41732From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
5.62181From_analysisRNASeq.brenneri.WBls:0000002.control_mean
5.85478From_analysisRNASeq.brenneri.WBls:0000002.control_median
6.29224From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
7.23784From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
7.60667From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
8.41986From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
WBls:00000040.275167From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.550334From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002416.1029From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
19.6563From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
19.788From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.012From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
22.3909From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:000003811.8182From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
12.4201From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
13.022From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:000004110.0956From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
1.05472From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
12.0969From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
1.75909From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.12947From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
2.69588From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
2.97297From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
3.00892From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
3.10439From_analysisRNASeq.brenneri.WBls:0000041.control_median
3.19987From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
3.8516From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
4.10713From_analysisRNASeq.brenneri.WBls:0000041.control_mean
4.38465From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
4.52817From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
5.15739From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
8.77892From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
WBls:00001013.8516From_analysisRNASeq.brenneri.total_over_all_stages.control_median
4.75235From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00206734
00206735
00206736
00206737
00206738
00206739
OrthologWBGene00006784Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00008551Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013914Caenorhabditis elegansFrom_analysisTreeFam
WBGene00037805Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00055316Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00055771Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00081417Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00119924Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00129121Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00130247Caenorhabditis japonicaFrom_analysisTreeFam
CBOVI.g4076Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2958Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4857Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9434Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15298Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14166Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2620Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13596Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4329Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g436Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_12910.g23984Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g9603Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7353Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00128.g5094Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11418Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010455Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_30124910Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00113693Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00226150Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8886Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00211001Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00244711Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263154Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287048Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00139250Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00157177Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00157438Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00151278Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00138792Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00138845Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00139075Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139080Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139143Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00139571Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00139661Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139702Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00140336Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00140406Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00140979Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141041Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141324Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00141395Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141609Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00141899Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142232Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142428Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143059Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143087Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00143107Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143890Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00144110Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144161Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00144205Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144228Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144426Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00145120Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00145291Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00145921Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146134Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00146335Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00146354Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147133Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147718Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147753Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147758Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147844Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147980Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00148482Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149105Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149172Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149252Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149704Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00150338Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00150985Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00151047Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00151456Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152107Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00152462Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152602Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153668Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153946Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153953Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154195Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154215Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154879Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155461Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155698Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155805Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156453Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156787Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156911Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157042Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00157395Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157433Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00157559Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157589Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157870Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158492Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158829Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159346Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159464Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160383Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160421Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160990Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161333Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162467Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162698Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163523Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163765Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00163846Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164276Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164940Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00185108Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190055Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190100Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190110Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190133Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190235Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190325Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190449Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190665Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190745Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190856Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191029Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191168Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191332Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191904Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192145Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192223Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192251Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192268Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192433Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00192500Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192627Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192749Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192846Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00192940Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193606Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193779Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193860Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193924Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194084Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194097Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194106Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194119Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194133Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194337Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194428Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194461Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194971Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00195140Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00219520Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-49. In C. elegans, unc-49 is involved in gamma-aminobutyric acid signaling pathway; locomotory behavior; and regulation of backward locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN05548
Corresponding_transcriptCBN05548.1
Other_sequenceCBC01280_1
CBC03568_1
JI481875.1
EU049602.1
Dviv_isotig01730
Dviv_isotig01731
CRC03502_1
JI474359.1
OVC01230_1
CJC06311_1
Dviv_isotig01727
Oden_isotig11873
Dviv_isotig01726
JI173655.1
CR00600
Dviv_isotig01736
Dviv_isotig10471
Dviv_isotig01733
ACC13002_1
Dviv_isotig10470
PPC02763
FF679062.1
CRC04815_1
HBC12284_1
Acan_isotig11761
Dviv_isotig01729
Dviv_isotig01728
Dviv_isotig01735
Dviv_isotig01725
JI244415.1
FF678116.1
JI177388.1
Dviv_isotig01734
Acan_isotig11576
ASC09701_1
Dviv_isotig01732
BMC07330_1
AS12490
Dviv_isotig10472
FC552536.1
JI233161.1
JI473398.1
JI220515.1
AA294204.1
PPC09079_1
HBC04018_1
FC552504.1
FC552734.1
Oden_isotig11874
EU939734.1
Experimental_infoMicroarray_resultsGPL14142_CBN05548_1516-1575_0.726_142_C
GPL14142_CBN05548_2003-2062_0.793_73_B
GPL14142_CBN05548_2266-2325_0.891_18_A
MethodGene