WormBase Tree Display for Gene: WBGene00153953

WBGene00153953 SMap: S_parent: Sequence: Cbre_Contig316
  Identity: Version: 1
    Name: CGC_name: Cbn-deg-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBN15228
      Molecular_name: CBN15228
        CBN15228.1
        CN19909
      Other_name: CBN15228
      Public_name: Cbn-deg-3
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-deg-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: deg
    RNASeq_FPKM: WBls:0000002 0.158066 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0.237799 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.340104 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.44241 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        0.444997 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.621461 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        0.665278 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.989342 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        1.33561 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
            RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
            RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        3.61538 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        5.4327 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        5.76621 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        5.77914 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        6.08429 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 4.99849 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        5.00061 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.00272 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (13)
      WBls:0000101 0.44241 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        1.03282 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00214471
      00214472
      00214473
      00214474
      00214475
      00214476
    Ortholog (32)
    Paralog (128)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans deg-3. In C. elegans, deg-3 is involved in positive regulation of locomotion involved in locomotory behavior and regulation of programmed cell death. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN15228
    Corresponding_transcript: CBN15228.1
    Other_sequence: NBC07327_1
      FJ807354.1
      DVC01086_1
      MIC00341_1
      NB10401
      EV851285.1
  Experimental_info: Microarray_results: GPL14142_CBN15228_1071-1130_0.920_3_B
      GPL14142_CBN15228_1533-1592_0.920_4_A
      GPL14142_CBN31814_960-1019_0.947_2_A
      GPL14142_CBN31814_964-1023_0.938_8_B
  Method: Gene