WormBase Tree Display for Gene: WBGene00090764
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WBGene00090764 | SMap | S_parent | Sequence | PPA_ChrV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | Ppa-syx-3.2 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA01210 | ||||||||
Molecular_name | PPA01210 | ||||||||
PPA01210.1 | |||||||||
PP68022 | |||||||||
Other_name | GENEPREDICTION_SNAP300000058928 | ||||||||
UMM-S2868-24.6 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-syx-3.2 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-syx-3.2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | syx | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis (3) | ||||||
WBls:0000101 | 15.3535 | From_analysis (3) | |||||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
5.11783 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
GO_annotation | 00173637 | ||||||||
00173638 | |||||||||
Ortholog (51) | |||||||||
Paralog | WBGene00105441 | Pristionchus pacificus | From_analysis (2) | ||||||
WBGene00274995 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00278566 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00281849 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00304493 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of C. elegans syx-3. In C. elegans, syx-3 is involved in positive regulation of defecation and regulation of muscle contraction. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA01210 | |||||||
Corresponding_transcript | PPA01210.1 | ||||||||
Experimental_info | Microarray_results | GPL14372_Probes_59550 | |||||||
GPL14372_Probes_59551 | |||||||||
GPL14372_Probes_59552 | |||||||||
Method | Gene |