WormBase Tree Display for CDS: PPA01210

PPA01210 SMap: S_parent: Sequence: PPA_ChrV
  Structure: Source_exons: 1 96
      237 329
      377 485
      576 650
      780 850
      979 1087
      1134 1207
      1288 1422
      1570 1680
      1770 1844
  DB_info: Database: pristionchus.org cds gene-UMM-S2868-24.6
    DB_remark: PPA-SYX-3.2 protein; contains similarity to Pfam domains PF00804 (Syntaxin), PF05739 (SNARE domain); contains similarity to Interpro domains IPR000727 (Target SNARE coiled-coil homology domain), IPR010989 (SNARE), IPR006011 (Syntaxin, N-terminal domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00090764
    Corresponding_transcript: PPA01210.1
    Corresponding_protein: PP68022
    Corresponding_oligo_set: GPL14372_Probes_59550
      GPL14372_Probes_59551
      GPL14372_Probes_59552
    Microarray_results: GPL14372_Probes_59550
      GPL14372_Probes_59551
      GPL14372_Probes_59552
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 15.3535 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S2868-24.6 Curator_confirmed: WBPerson4055
  Method: curated