WormBase Tree Display for Gene: WBGene00044083

WBGene00044083 SMap: S_parent: Sequence: B0564
  Identity: Version: 1
    Name: CGC_name: tin-9.2 Paper_evidence: WBPaper00024877
          Person_evidence: WBPerson2173
      Sequence_name: B0564.1
      Molecular_name: B0564.1b
        B0564.1b.1
        CE37950
        B0564.1c
        CE47748
        B0564.1b.2
        B0564.1c.1
      Other_name: tim9b Accession_evidence: EMBL AF150109
        CELE_TIN-9.2 Accession_evidence: NDB BX284604
      Public_name: tin-9.2
    DB_info: Database: AceView gene 4N865
        WormFlux gene WBGene00044083
        NDB locus_tag CELE_TIN-9.2
        Panther gene CAEEL|WormBase=WBGene00044083|UniProtKB=Q9Y0V2
          family PTHR13172
        NCBI gene 24105311
        RefSeq protein NM_001380504.1
            NM_001392423.1
        SwissProt UniProtAcc Q9Y0V2
        TrEMBL UniProtAcc J7SF95
        UniProt_GCRP UniProtAcc Q9Y0V2
    Species: Caenorhabditis elegans
    History: Version_change: 1 14 Jan 2005 16:14:57 WBPerson1983 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tin
    Allele (36)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP4532
      CEOP5591
    Ortholog: WBGene00150128 Caenorhabditis brenneri From_analysis: OMA
      WBGene00161775 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00190767 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00062729 Caenorhabditis remanei From_analysis: TreeFam
      FB:FBgn0027358 Drosophila melanogaster From_analysis: OrthoFinder
            PhylomeDB
      ZFIN:ZDB-GENE-050417-370 Danio rerio From_analysis: OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:4022 Homo sapiens From_analysis: Hieranoid
            OrthoFinder
      MGI:1315196 Mus musculus From_analysis: Hieranoid
            OrthoFinder
      RGD:71097 Rattus norvegicus From_analysis: Hieranoid
            OrthoFinder
    Paralog: WBGene00000202 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00007201 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Concise_description: tin-9.2 encodes two disjoint protein products from a dicistronic mRNA: 1) one of two C. elegans members of the Tin9 family of mitochondrial import proteins and, 2) a predicted Rrp41 subunit of the exosomal 3'-5' exoribonuclease complex (B0564.1); TIN-9.2 is required for normal fertility, body size, time of reproductive onset, and distal tip cell migration and somatic gonad development; TIN-9.2 localizes to mitochondria. Paper_evidence: WBPaper00024877
            WBPaper00028539
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 20 Jul 2011 00:00:00
      Automated_description: Predicted to enable metal ion binding activity. Involved in inductive cell migration; regulation of growth; and reproduction. Located in mitochondrion. Is an ortholog of human TIMM10B (translocase of inner mitochondrial membrane 10B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0564.1b
      B0564.1c
    Corresponding_transcript: B0564.1b.1
      B0564.1b.2
      B0564.1c.1
  Experimental_info: RNAi_result (18)
    Expr_pattern: Expr3107
      Expr1040184
      Expr1143351
      Expr2017408
      Expr2035547
    Construct_product: WBCnstr00011141
    Microarray_results (31)
    Expression_cluster (91)
  Map_info: Map: IV Position: 8.00793 Error: 0.044014
    Positive: Positive_clone: B0564 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024877
    WBPaper00026571
    WBPaper00036249
    WBPaper00038491
    WBPaper00055090
    WBPaper00061616
  Remark: tin-9.2 was formerly incorrectly connected to CDS B0564.1. This CDS has subsequently been made into two splice variants (.1a & .1b) and tin-9.2 is now correctly connected to .1b Person_evidence: WBPerson2173
        WBPerson359
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene