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WormBase Tree Display for Gene: WBGene00190767

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Name Class

WBGene00190767SMapS_parentSequenceCbre_Contig157
IdentityVersion1
NameSequence_nameCBN28802
Molecular_nameCBN28802
CBN28802.1
CN29873
Public_nameCBN28802
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:52WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002 (11)
WBls:000000416.8743From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
8.43715From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
34.2544From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
43.6595From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
44.9336From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
75.2325From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
89.3827From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:000003848.5538From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
49.0764From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
49.5989From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:000010126.4228From_analysisRNASeq.brenneri.total_over_all_stages.control_median
29.1789From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
Ortholog (27)
ParalogWBGene00153454Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00161775Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00150958Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Exoribonuclease, PH domain 2 superfamily; 3' exoribonuclease family, domain 2; Exoribonuclease, phosphorolytic domain 2; PNPase/RNase PH domain superfamily; 3' exoribonuclease family, domain 1; Exoribonuclease, phosphorolytic domain 1; and Ribosomal protein S5 domain 2-type fold. Is an ortholog of C. elegans exos-4.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN28802
Corresponding_transcriptCBN28802.1
Other_sequence (16)
Experimental_infoMicroarray_resultsGPL14142_CBN23050_476-535_0.906_29_C
GPL14142_CBN23050_594-653_0.968_1_A
MethodGene