WormBase Tree Display for Gene: WBGene00062729

WBGene00062729 SMap: S_parent: Sequence: Crem_Contig19
  Identity: Version: 4
    Name: CGC_name: Cre-exos-4.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE10298
      Molecular_name: CRE10298
        CRE10298.1
        RP36190
      Other_name: cr01.sctg33.wum.73
        Cre-tin-9.2 From_analysis: Inferred_from_orthology
      Public_name: Cre-exos-4.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:47 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE10298
                Other_name: cr01.sctg33.wum.73
        3 04 Jul 2008 11:06:44 WBPerson4055 Name_change: CGC_name: Cre-tin-9.2
        4 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-exos-4.1
                Other_name: Cre-tin-9.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: exos
    RNASeq_FPKM: WBls:0000004 53.8721 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        54.9054 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        55.9388 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 10.6437 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        44.0993 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        48.6524 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        49.3466 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        50.0408 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        67.0603 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 15.4202 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        45.2512 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        57.3077 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        63.0256 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 101.281 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        103.58 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        58.0362 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        60.6419 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        64.0905 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        80.5072 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        80.7589 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        96.924 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 (12)
      WBls:0000101 49.3466 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        50.779 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (28)
    Paralog: WBGene00064880 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00083974 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00085033 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00053415 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072335 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Exoribonuclease, PH domain 2 superfamily; Tim10-like; Tim10/DDP family zinc finger; Tim10-like domain superfamily; PNPase/RNase PH domain superfamily; 3' exoribonuclease family, domain 1; Exoribonuclease, phosphorolytic domain 1; and Ribosomal protein S5 domain 2-type fold. Is an ortholog of C. elegans exos-4.1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE10298
    Corresponding_transcript: CRE10298.1
    Other_sequence (60)
  Experimental_info: Expr_pattern: Expr1108797
    Microarray_results: GPL14146_CRE10298_1045-1104_0.947_1_B
      GPL14146_CRE10298_846-905_0.939_5_C
      GPL14146_CRE10298_978-1037_0.944_2_A
  Method: Gene