WormBase Tree Display for Gene: WBGene00007201

WBGene00007201 SMap: S_parent: Sequence: B0564
  Identity: Version: 4
    Name: CGC_name: exos-4.1 Person_evidence: WBPerson699
            WBPerson6229
      Sequence_name: B0564.1
      Molecular_name: B0564.1a
        B0564.1a.1
        CE20469
        B0564.1a.2
        B0564.1a.3
      Other_name: CELE_EXOS-4.1 Accession_evidence: NDB BX284604
      Public_name: exos-4.1
    DB_info: Database: AceView gene 4N865
        WormQTL gene WBGene00007201
        WormFlux gene WBGene00007201
        NDB locus_tag CELE_EXOS-4.1
        Panther gene CAEEL|WormBase=WBGene00007201|UniProtKB=Q17533
          family PTHR11953
        NCBI gene 24105309
        RefSeq protein NM_001380505.2
        SwissProt UniProtAcc Q17533
        TREEFAM TREEFAM_ID TF313915
        UniProt_GCRP UniProtAcc Q17533
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 14 Oct 2004 13:20:22 WBPerson1971 Name_change: CGC_name: tin-9.2
        3 14 Jan 2005 16:29:10 WBPerson1983 Name_change: CGC_name: Removed
        4 04 Jun 2007 15:54:19 WBPerson2970 Name_change: CGC_name: exos-4.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: exos
    Allele (36)
    RNASeq_FPKM (74)
    GO_annotation (19)
    Contained_in_operon: CEOP4532
      CEOP5591
    Ortholog (33)
    Paralog: WBGene00000202 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000798 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00044083
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be involved in RNA metabolic process. Predicted to be located in nucleolus. Predicted to be part of cytoplasmic exosome (RNase complex) and nuclear exosome (RNase complex). Is an ortholog of human EXOSC4 (exosome component 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0564.1a
    Corresponding_transcript: B0564.1a.1
      B0564.1a.2
      B0564.1a.3
    Other_sequence (58)
    Associated_feature: WBsf646511
      WBsf981838
  Experimental_info: RNAi_result (18)
    Expr_pattern: Expr1012000
      Expr1033102
      Expr2011403
      Expr2029639
    Drives_construct: WBCnstr00033923
    Construct_product: WBCnstr00033923
    Microarray_results (32)
    Expression_cluster (93)
    Interaction (196)
  Map_info: Map: IV Position: 8.11494 Error: 0.048753
    Positive: Positive_clone: B0564 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00041771
    WBPaper00046427
    WBPaper00055090
    WBPaper00061983
  Remark: CDS B0564.1 was formerly incorrectly connected to tin-9.2. This CDS has subsequently been made into two splice variants (.1a & .1b) and tin-9.2 is now correctly connected to .1b Person_evidence: WBPerson2173
        WBPerson359
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene