WormBase Tree Display for Gene: WBGene00043302

WBGene00043302 SMap: S_parent: Sequence: F32D8
  Identity: Version: 2
    Name: Sequence_name: F32D8.11
      Molecular_name: F32D8.11
        F32D8.11.1
        CE23697
        F32D8.11.2
        F32D8.11.3
      Other_name: CELE_F32D8.11 Accession_evidence: NDB BX284605
      Public_name: F32D8.11
    DB_info: Database: WormFlux gene WBGene00043302
        NDB locus_tag CELE_F32D8.11
        NCBI gene 13214984
        RefSeq protein NM_001269344.4
        TrEMBL UniProtAcc D0VWN9
        UniProt_GCRP UniProtAcc D0VWN9
    Species: Caenorhabditis elegans
    History: Version_change: 1 04 Oct 2004 10:58:09 WBPerson1971 Event: Created
                Killed
        2 09 Oct 2009 14:36:49 WBPerson1983 Event: Resurrected
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (21)
    RNASeq_FPKM (74)
    Ortholog: WBGene00088485 Caenorhabditis briggsae From_analysis: Inparanoid_8
      chrV_pilon.g15624 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in intestine; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; clk-1; and aak-2 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including D-glucopyranose; stavudine; and Zidovudine based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F32D8.11
    Corresponding_CDS_history: F32D8.11a:wp114
      F32D8.11b:wp114
    Corresponding_transcript: F32D8.11.1
      F32D8.11.2
      F32D8.11.3
    Associated_feature: WBsf669340
  Experimental_info: RNAi_result: WBRNAi00046133 Inferred_automatically: RNAi_primary
      WBRNAi00000242 Inferred_automatically: RNAi_primary
      WBRNAi00000465 Inferred_automatically: RNAi_primary
      WBRNAi00014219 Inferred_automatically: RNAi_primary
      WBRNAi00031680 Inferred_automatically: RNAi_primary
      WBRNAi00089066 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1040152
      Expr1150017
      Expr2003221
      Expr2021433
    Microarray_results (42)
    Expression_cluster: WBPaper00041071:spe-44_upregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045316:prg-1_downregulated_L1
      WBPaper00045316:prg-1_downregulated_L2
      WBPaper00045316:prg-1_downregulated_L3
      WBPaper00045774:clk-1_upregulated
      WBPaper00045774:clk-1_upregulated_CoQ10_independent
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00048952:glucose_induced
      WBPaper00050096:P.aeruginosa_downregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051039:intestine_enriched
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053318:mir-71(n4115)_downregulated_mRNA
      WBPaper00053664:ins-11(tm1053)_upregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055482:Tunicamycin_downregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056275:P.aeruginosa_downregulated
      WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
      WBPaper00056731:human-amylin_downregulated
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00057154:HeatShock_downregulated_mRNA
      WBPaper00058711:wdr-5(ok1417)_downregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058725:sftb-1(cer39)_downregulated
      WBPaper00058948:PA14_upregulated
      WBPaper00059117:B.subtilis_downregulated
      WBPaper00059253:sucrose_stearic-acid_upregulated
      WBPaper00059253:sucrose_upregulated
      WBPaper00059754:E.faecalis_OG1RF_upregulated
      WBPaper00059824:rnp-6(dh1127)_regulated_OP50
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00059895:wounding_downregulated
      WBPaper00059987:Wounding_downregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00061340:FLP
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:nhr-107_19485-nhr-109_3743
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064871:PA14-gacA()_downregulated_AWA
      WBPaper00064871:PA14_downregulated_AWA
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:AFD_enriched
      WBPaper00065288:mdt-15(tm2182)_downregulated
      WBPaper00065749:Heat-Shock-With-Recovery_downregulated_N2
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      cgc4386_cluster_2_2
      cgc4489_group_22
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00028789:PA14_vs_gacA_upregulated_4hr
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00031850:mdt-15(RNAi)_downregulated
      WBPaper00032165:differentially_expressed_with_age_medoid_6
      WBPaper00032948:StarveUp3
      WBPaper00034739:N2moreDR1350
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035227:heat_shock_regulated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00036286:Pattern_C
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:tax-6null_down_regulated
      WBPaper00040426:CYE-1_CDK-2AF_downregulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00040876:mir-35_downregulated
      WBPaper00040963:Q100_up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041002:HF_11d_0.2mM_Down
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00042204:Comamonas_DA1877_downregulated
      WBPaper00042258:DA1877_downregulated_GravidAdult
      WBPaper00042258:DA1877_downregulated_YoungAdult
      WBPaper00042258:HT115_downregulated_YoungAdult
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00049311:AgNO3_regulated
      WBPaper00050538:Fasting_upregulated
      WBPaper00050538:Fasting_upregulated_cholesterol-dependent
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_upregulated_L1
      WBPaper00055435:MUA-AuNP-0.5_downregulated
      WBPaper00055899:nitroguanidine_regulated
      WBPaper00056391:HT115_downregulated
      WBPaper00057098:SiO2-nanoparticles_downregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
  Map_info: Positive: Positive_clone: F32D8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 2.82707
  Remark: The corresponding CDS object for this gene had been created and removed before WormBase introduced the concept of unique gene identifiers. This (dead) gene object exists as an attempt to make sure that a gene ID exists for every worm gene prediction that has ever existed. Curator_confirmed: WBPerson1971
    [050610 pad] Automatic assignment of Sequence_name connection using info taken from Public_name tags.
    [091009 pad] Resurrected based on further analysis. Now appears to be a legitimate gene product, although this product is part of a complex loci. Curator_confirmed: WBPerson1983
  Method: Gene