WormBase Tree Display for Expression_cluster: WBPaper00045316:prg-1_downregulated_L1
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| WBPaper00045316:prg-1_downregulated_L1 | Description | Protein coding genes with decreased expression in prg-1(wm161) comparing to in N2. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Cuffdiff and DEGseq were used to calculate the differential expression of protein-coding genes with and without the prg-1 mutation, and authors selected genes which had more than two-fold difference in expression (P < 0.05, q < 0.01 of Storey) from DEGseq outcomes. The intersection of genes which authors selected from DEGseq outcomes and genes which had more than two-fold difference in expression (P < 0.05) from Cuffdiff outcomes was defined as differentially expressed genes. | ||
| Reference | WBPaper00045316 | ||
| Based_on_WB_Release | |||
| Gene (177) | |||
| Attribute_of | RNASeq | ||
| Regulation | Regulated_by_gene | WBGene00004178 | |
| Associated_with | Life_stage | WBls:0000024 |
