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WormBase Tree Display for Gene: WBGene00027947

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Name Class

WBGene00027947SMapS_parentSequencecb25.fpc0110
IdentityVersion4
NameCGC_nameCbr-unc-77From_analysisInferred_from_orthology
Sequence_nameCBG05508
Molecular_nameCBG05508a
CBG05508a.1
CBP38433
CBG05508b
CBP40952
CBG05508c
CBP43606
CBG05508b.1
CBG05508c.1
Other_nameCBG_05508Accession_evidenceNDBHE601369
Cbr-nca-1From_analysisInferred_from_orthology
Public_nameCbr-unc-77
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:51WBPerson2970Name_changeCGC_nameCbr-nca-1
324 Jul 2008 11:56:35WBPerson1847EventAcquires_mergeWBGene00027948
420 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-unc-77
Other_nameCbr-nca-1
Acquires_mergeWBGene00027948
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00110642
WBVar00110643
WBVar00110644
WBVar00023249
WBVar00110645
RNASeq_FPKMWBls:00000022.36597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.4287From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.73415From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.40777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.54603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.39734From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.43712From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.176217From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.265336From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.354454From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.337065From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.480523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.57972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.71779From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.85585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.0572From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.61023From_analysisRNASeq.briggsae.WBls:0000004.control_mean
1.63075From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.92763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.427177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.4762From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.72231From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.26354From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.27517From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.56026From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.07413From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.94911From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.420984From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.34502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.28995From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.48274From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.62046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.77334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.778547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.864536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.874743From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.884949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.34322From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.84486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.66215From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.74048From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.43936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.63062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.251056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.371738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.430182From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.460992From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.533055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.534071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.471831From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.497023From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.680074From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.4762From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.62515From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.56288From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.51568From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131360
00131361
00131362
00131363
00131364
OrthologWBGene00003558Caenorhabditis elegansFrom_analysisOrthoMCL
WBGene00006809Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00066082Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00154155Caenorhabditis brenneriFrom_analysisOMA
WormBase-Compara
WBGene00140494Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00122833Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00107390Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00153171Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g8570Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g184Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g185Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14560Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g16683Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21109Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10428Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7911Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g7912Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10214Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2263Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15963Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17987Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25086Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g5565Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10670Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_06589.g20353Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-77Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17351Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00045.g2385Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18713Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_18714Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_20372Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013653Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12811Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14329Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40161400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00222695Brugia malayiFrom_analysisWormBase-Compara
chrIV_pilon.g10560Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00135142Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00073165Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074869Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00080174Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084742Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00245319Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00092845Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00266153Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00037668Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00025194Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028228Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036666Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic cation channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-77. In C. elegans, unc-77 is involved in positive regulation of GABAergic synaptic transmission; positive regulation of cholinergic synaptic transmission; and positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05508a
CBG05508b
CBG05508c
Corresponding_CDS_historyCBG05508:bp194
CBG05508:bp255
Corresponding_transcriptCBG05508a.1
CBG05508b.1
CBG05508c.1
Other_sequenceJO468006.1
FC548949.1
ASC08878_1
JO468378.1
FG620967.1
JI242386.1
AS06149
RSC03224_1
FE914443.1
FG620975.1
OOC00988_1
JI164103.1
RS10662
FG620968.1
CR08460
CRC03399_1
JO469564.1
FC539987.1
ASC39627_1
FG620964.1
Dviv_isotig34244
EY469491.1
FG351343.1
EY467030.1
JI255275.1
AS09929
ASC07250_1
JI172681.1
JI229652.1
JI171484.1
Acan_isotig03720
FG620961.1
ACC30963_1
Experimental_infoExpr_patternExpr1050144
Microarray_resultsGPL8303_CB6_WBGene00027947_A
GPL8303_CB6_WBGene00027948_A
GPL8303_CB6_WBGene00027948_B
GPL14143_CBG05508_5341-5400_0.891_12_C
GPL14143_CBG05508_5552-5611_0.948_1_B
GPL14143_CBG05508_5641-5700_0.930_2_A
MethodGene