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WormBase Tree Display for Gene: WBGene00022731

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Name Class

WBGene00022731SMapS_parentSequenceZK402
IdentityVersion1
NameSequence_nameZK402.5
Molecular_nameZK402.5
ZK402.5.1
CE53536
Other_nameCELE_ZK402.5Accession_evidenceNDBBX284606
Public_nameZK402.5
DB_infoDatabaseAceViewgeneXC16
WormQTLgeneWBGene00022731
WormFluxgeneWBGene00022731
NDBlocus_tagCELE_ZK402.5
PanthergeneCAEEL|WormBase=WBGene00022731|UniProtKB=Q23477
familyPTHR23362
NCBIgene191315
RefSeqproteinNM_001374949.1
TREEFAMTREEFAM_IDTF322256
TrEMBLUniProtAccQ23477
UniProt_GCRPUniProtAccQ23477
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:06WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (40)
RNASeq_FPKM (74)
OrthologWBGene00039293Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00023828Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00069550Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00036139Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00124063Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00057293Caenorhabditis remaneiFrom_analysisInparanoid_8
chrX_pilon.g18429Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g18430Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g18431Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (37)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABplppppaa; ABprppppaa; germline precursor cell; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; glp-1; and let-60 based on RNA-seq and microarray studies. Is affected by twelve chemicals including stearic acid; sucrose; and Doxycycline based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK402.5
Corresponding_CDS_historyZK402.5:wp272
Corresponding_transcriptZK402.5.1
Associated_featureWBsf1004029
WBsf1022265
Experimental_infoRNAi_resultWBRNAi00022001Inferred_automaticallyRNAi_primary
WBRNAi00012482Inferred_automaticallyRNAi_primary
WBRNAi00021999Inferred_automaticallyRNAi_primary
WBRNAi00059411Inferred_automaticallyRNAi_primary
WBRNAi00043308Inferred_automaticallyRNAi_primary
WBRNAi00082475Inferred_automaticallyRNAi_primary
WBRNAi00021998Inferred_automaticallyRNAi_primary
WBRNAi00082672Inferred_automaticallyRNAi_primary
WBRNAi00059409Inferred_automaticallyRNAi_primary
Expr_patternExpr1162840
Expr2008834
Expr2027068
Drives_constructWBCnstr00024018
Construct_productWBCnstr00024018
Microarray_results (22)
Expression_clusterWBPaper00032528:L3_depleted
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00045090:RDE-12_dependent
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049635:dop-1(vs100)_downregulated
WBPaper00050344:ASER-neuron_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056826:SGP_biased
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00058925:acox-1.1(ok2257)_downregulated
WBPaper00059253:sucrose_stearic-acid_upregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059932:cnd-1(ju29)_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060661:hypoxia_downregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00060921:tdc-1(n3419)_downregulated
WBPaper00060921:tph-1(mg280)_downregulated
WBPaper00061340:Parent_of_PVP_and_rect_V
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061527:176662_at-Y53F4B.16
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00064494:postdauer_upregulated_WholeAnimal
WBPaper00064509:static-magnetic-field_upregulated
WBPaper00064788:ketamine_downregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065749:Heat-Shock_upregulated_N2
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065993:mml-1(RNAi)-neuron_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030839:Embryo_A_Class
WBPaper00032948:FedUp
WBPaper00034661:AgNPs_downregulated
WBPaper00035227:heat_shock_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_F
WBPaper00036429:glp-1(oz112)_upregulated
WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
WBPaper00037695:WC_5-day
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00040426:CYD-1_CDK-4_downregulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042128:gei-8(ok1671)_upregulated
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00042548:miRISC_enriched
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_allantoin_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00050407:hsp-6(RNAi)_downregulated
[cgc5376]:let-60(G12V)-regulated_genes
InteractionWBInteraction000216581
WBInteraction000227158
Map_infoPositivePositive_cloneZK402Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-18.1707
MethodGene