WormBase Tree Display for Gene: WBGene00020646

WBGene00020646 SMap: S_parent: Sequence: T21D11
  Identity: Version: 2
    Name: CGC_name: zmp-6 Paper_evidence: WBPaper00036427
          Person_evidence: WBPerson345
      Sequence_name: T21D11.1
      Molecular_name: T21D11.1
        T21D11.1.1
        CE28686
      Other_name: CELE_T21D11.1 Accession_evidence: NDB BX284603
      Public_name: zmp-6
    DB_info: Database: AceView gene 3I336
        WormQTL gene WBGene00020646
        WormFlux gene WBGene00020646
        NDB locus_tag CELE_T21D11.1
        Panther gene CAEEL|WormBase=WBGene00020646|UniProtKB=G5ECC4
          family PTHR10201
        NCBI gene 176025
        RefSeq protein NM_066198.7
        TrEMBL UniProtAcc G5ECC4
        UniProt_GCRP UniProtAcc G5ECC4
        OMIM gene 600108
            604629
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Jan 2016 15:29:00 WBPerson2970 Name_change: CGC_name: zmp-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: zmp
    Allele (30)
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog: WBGene00042327 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00066454 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130877 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151643 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00054903 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00226152 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4227 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4988 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19499 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9508 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15361 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25778 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1212 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2246 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g24117 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6868 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1457 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00132.g5217 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-zmp-6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12867 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01549.g21633 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21681 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_21903 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008635 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07929 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8898 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30284700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8121 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00247703 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262161 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294292 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-031202-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      ZFIN:ZDB-GENE-030131-6152 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      ZFIN:ZDB-GENE-100603-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      HGNC:7174 Homo sapiens From_analysis: EnsEMBL-Compara
            Inparanoid
            Panther
      HGNC:7159 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      HGNC:7167 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      HGNC:14249 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            Panther
      HGNC:14250 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      MGI:97005 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      MGI:1340026 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      MGI:1353466 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      MGI:3039232 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      RGD:3100 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            Panther
      RGD:620195 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      RGD:620196 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      RGD:1306843 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            Panther
      RGD:1306642 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
      RGD:1308730 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Panther
    Paralog: WBGene00006987 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010423 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010524 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012185 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012364 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016283 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019212 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00194737 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metalloendopeptidase activity. Predicted to be involved in collagen catabolic process and extracellular matrix organization. Predicted to be located in extracellular matrix. Expressed in anchor cell. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); reproductive organ cancer (multiple); and tooth disease (multiple). Is an ortholog of human MMP26 (matrix metallopeptidase 26). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model (16)
  Molecular_info: Corresponding_CDS: T21D11.1
    Corresponding_transcript: T21D11.1.1
    Other_sequence: Dviv_isotig16992
      OOC01145_1
      JI174962.1
      Dviv_isotig16993
      PPC07489_1
    Associated_feature: WBsf651189
      WBsf992969
      WBsf1015209
      WBsf226945
      WBsf226946
      WBsf226947
  Experimental_info: RNAi_result: WBRNAi00053726 Inferred_automatically: RNAi_primary
      WBRNAi00018971 Inferred_automatically: RNAi_primary
      WBRNAi00089161 Inferred_automatically: RNAi_primary
      WBRNAi00005413 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14537
      Expr1028167
      Expr1038992
      Expr1157276
      Expr2018183
      Expr2036320
    Drives_construct: WBCnstr00021178
      WBCnstr00024990
      WBCnstr00040503
    Construct_product: WBCnstr00024990
    Microarray_results (16)
    Expression_cluster (140)
    Interaction (25)
  Map_info: Map: III Position: -0.76455
    Positive: Positive_clone: T21D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00056095
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene